Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01964 ATGAACATGATGAGAAGATTAAAAAGCATTGCTTCTGGTAGAACCTCTATTTCATCAGATCCTGGTGGAGATTCTACCATAAAAAGAGCCAAGTTTGATCAAGAGACTGAAGGAAAAGGAAATGGGGAAACAAAGTATGTAGATGCATCCCAAGAAGATGCATCTAGTACATGTAATTCTAATGTTTCTGCGGTGGCTAAAACCGAGAAGTCAGGTTGTGAACAGCTTCCAAAAGAATTAAACGAAATGAAAATTAAAGACGATAAAAGCAAAAACAACAACGAAAAGGATATGGAGGCAACTATTGTGAACGGAAATGGAACGGAAACTGGTCAAGTAATTACAACTTCTATTGGTGGTCGAGATGGACAGCCAAAGAGGATAATCTCATATGCGGCAGAACGTGTTGTTGGTACCGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCGTTGAAACTGGCGAAGCCGTTGCAATAAAGAAAGTCTTACAAGACAAGAGATATAAAAATAGGGAACTCCAGGTTATGCGTATGCTTGAACATACCAATGTTCTTAAACTGAAGCACTGTTTCTACTCGACGGCTGAAAAAGAAGAGGTGTACCTTAACTTAGTTTTGGAGTACGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGGATGCACCAACACATGCCTATAATTTATGTGCAACTATATATGTATCAGATATGCCGCGGTTTAAACTATATGCATCATGTGGTTGGAGTCTGTCACCGTGACATCAAACCTCAGAATCTATTGGTTAATCCTGCGAGTCATCAATTAAAGATATGTGATTTTGGTAGTGCAAAAATGTTGGTGCCTGGTGAACCCAACATATCATACATATGCTCACGGTATTATAGAGCTCCTGAACTTATATTCGGTGCAACAGAATACACAACTGCTATTGATGTTTGGTCTGCTGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACAGCCAATCTTTCCCGGAGAGAGTGGCGTTGATCAGTTGGTAGAGATCATTAAGATTTTGGGGACACCAACAAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTCAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGATCTTTCACAAAAGCATGCCTTCGGAAGCAGTGGACCTTGTGTCGAGGATGCTTCAGTATTCACCAAATCTACGTTGCACAGCTTTGGAAGCATGTGCACACTCCTTCTTTGATGATCTCCGAGACCCAAATGCCCGCTTACCGAATGGGCAAGAACTACCCCCTTTGTTTGATTTTACAGCTCAAGAGTTGGCAGGCGCACCTGATGAGTTGCGTCGGCGTCTCATTCCCGAGCATGCAAGGAGTTGA 1383 0.4165 MNMMRRLKSIASGRTSISSDPGGDSTIKRAKFDQETEGKGNGETKYVDASQEDASSTCNSNVSAVAKTEKSGCEQLPKELNEMKIKDDKSKNNNEKDMEATIVNGNGTETGQVITTSIGGRDGQPKRIISYAAERVVGTGSFGVVYQAKCVETGEAVAIKKVLQDKRYKNRELQVMRMLEHTNVLKLKHCFYSTAEKEEVYLNLVLEYVPETVYRVSKHYVRMHQHMPIIYVQLYMYQICRGLNYMHHVVGVCHRDIKPQNLLVNPASHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPIFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKSMPSEAVDLVSRMLQYSPNLRCTALEACAHSFFDDLRDPNARLPNGQELPPLFDFTAQELAGAPDELRRRLIPEHARS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01964 460 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
Trre14g01964 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Trre14g01964 460 FunFam Glycogen synthase kinase-3 beta 115 210 - -
Trre14g01964 460 SUPERFAMILY Protein kinase-like (PK-like) 130 440 IPR011009 -
Trre14g01964 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Trre14g01964 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01964 460 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01964 460 CDD STKc_GSK3 129 418 IPR039192 -
Trre14g01964 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 95 459 - -
Trre14g01964 460 MobiDBLite consensus disorder prediction 9 23 - -
Trre14g01964 460 MobiDBLite consensus disorder prediction 1 59 - -
Trre14g01964 460 MobiDBLite consensus disorder prediction 26 42 - -
Trre14g01964 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01964 460 Gene3D Phosphorylase Kinase; domain 1 115 210 - -
Trre14g01964 460 FunFam Shaggy-related protein kinase kappa 211 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01964 Trre-Chr14 18194598 18198117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01964 137 418 Core Cell Cycle Gene Families AT1G76540 36.242 1.92e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Trre14g01964 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01964 K00924 - gmx:100786458 822.387