Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01959 ATGGATAATAACTATGGTTCATCATCATCTTCTCCATATCGATATCCAAACCCTTATATGTATCCCCCTAACCCTAACCCTAACCCTAACCCTCATCAACCATATCCACCTCAAGATCCCTATGCACATTCTCATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCATTCAACTATTCCTATCCTAGACCATACCCTCCTCCTCCTCCTCCTCAATTAGTACCCTCTTATCCTTATCCTCCATACCATGTTCCTCAAGGAACTCATAATCCTACTCAACCTTCCCTTTCACACCATGCTAGCTTATTACAGCATGGATCATCCTCTCATCATTATTATTATCAACAAAATACAACTTCTCATGAAGATCGTCCCGATGCTCATTCGCGACATAATAGCTTCTCTGGTCCTTATTGGCATGAGACATCAAGTTCAACAGGTGGTGGTGGTGGTGGAGTATCACAAACTAGTGGTGCTGGTGGTGGTGATAATTCCAGGCCTTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGATAGTCAGGCAACTTCTCCTGCGGCGCCTCCTGCTGTTGCAGCTCAACCTTTTATGCATTCGATATCGGTACCGAAGATGCAACAGAAGAAGGATGATTTTTATGGATATTCGAATAACTCGTTCTCGGGTTATGGGTCCTCGTACCAGAATCGGGTTAACTCGGGTAGATTTTCGGATTTTTCTGGTTCGTTTAATGACTCGATGTATAATCAGAGCTTGCAGGTTGTTCCAGTGCAGAATAAAGGGTCATTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCGAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGCATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCCGTAATTGGGAGGACTTTTGTCATTAGCAACTCTGAAAATCCTGTTTGGAGTCAGCATTTTTATGTTCCTGTTGCACATTACGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGTATTGTAGCGATTCCAGTGGAACAAATATACTCAGGAGAGATAGTTGAAGGAGCTTACTCTGTCCTGAATAGTAATGGGAAACCTTGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGAAACTAAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATCGGAGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCTGATGGAAGCCTCCCTAATGTTTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATCTTTGATGCCATAAGTCAAGCTCGGCGCTTGATTTATATTACAGGTTGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGAGATGGCGGTTATGCATCAGATTATACCTTGGGTGATCTCCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCAACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCACGATGAGGAAACTAGACGGTTTTTCAAGCACTCGTCAGTCCATGTACTGCTTTGTCCCCGCATAGCTGGAAAACGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATACACACATCATCAGAAAACTGTAATTGTGGATGCGGATGCTGGAAATAACAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCACCACCCTCTCTTTAAGACATTACAGACAATACATAAGGATGATTATCACAACCCCACTTTCACGGGTAACACGGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTCTTAACAAACTTTGAGGAGCGGTGGTTAAAAGCTTCAAAACCGCATGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTTAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGACGATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGCGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATCGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAAGACCTCGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGTGCTGCCACACAAAGGATTCTCTTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGGGAGGCCATAAATCTGTACGAAAATGTCAATGTGTCAGGGAATCCTCCCCAAGCAAATACTCCACAAGCAAATAGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATCGTGGGATCCGCAAACATTAACCAACGGTCTATGGAAGGAACAAGGGACAGTGAGATTGCTATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACAGTCTTGTCCACATGGACAAATACATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTAATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAGGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGAAAATGAAGTAACAGAAATGAGAGGGCATCTACTAAAATACCCTGTAGATGTAGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCATGAAGAGTTCCCTGATGTAGGAGGAAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA 3273 0.4134 MDNNYGSSSSSPYRYPNPYMYPPNPNPNPNPHQPYPPQDPYAHSHAPPYPYPYISSHSFNYSYPRPYPPPPPPQLVPSYPYPPYHVPQGTHNPTQPSLSHHASLLQHGSSSHHYYYQQNTTSHEDRPDAHSRHNSFSGPYWHETSSSTGGGGGGVSQTSGAGGGDNSRPSAYPRLDDLMNNVRLSDSQATSPAAPPAVAAQPFMHSISVPKMQQKKDDFYGYSNNSFSGYGSSYQNRVNSGRFSDFSGSFNDSMYNQSLQVVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMHKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHYAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEIVEGAYSVLNSNGKPCKQGAVLSLSIQYIPMEKLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDGGYASDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINLYENVNVSGNPPQANTPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSCPHGQIHGYRMSLWAEHTGTINDCFLQPESLECVRRVRAIGEMNWKQFAENEVTEMRGHLLKYPVDVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01959 1090 MobiDBLite consensus disorder prediction 1 15 - -
Trre14g01959 1090 MobiDBLite consensus disorder prediction 137 165 - -
Trre14g01959 1090 SMART pld_4 936 963 IPR001736 GO:0003824
Trre14g01959 1090 SMART pld_4 602 637 IPR001736 GO:0003824
Trre14g01959 1090 CDD C2_plant_PLD 272 424 - -
Trre14g01959 1090 SUPERFAMILY Phospholipase D/nuclease 782 1022 - -
Trre14g01959 1090 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 275 425 IPR035892 -
Trre14g01959 1090 ProSiteProfiles C2 domain profile. 255 401 IPR000008 -
Trre14g01959 1090 PANTHER PHOSPHOLIPASE D 267 1081 IPR015679 -
Trre14g01959 1090 MobiDBLite consensus disorder prediction 1 48 - -
Trre14g01959 1090 MobiDBLite consensus disorder prediction 78 174 - -
Trre14g01959 1090 Gene3D C2 domain 272 412 IPR035892 -
Trre14g01959 1090 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 936 963 IPR001736 GO:0003824
Trre14g01959 1090 FunFam Phospholipase D delta 272 419 - -
Trre14g01959 1090 Gene3D Endonuclease Chain A 748 986 - -
Trre14g01959 1090 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 602 637 IPR001736 GO:0003824
Trre14g01959 1090 SMART C2_3c 278 400 IPR000008 -
Trre14g01959 1090 Pfam Phospholipase D C terminal 1011 1080 IPR024632 -
Trre14g01959 1090 Pfam Phospholipase D Active site motif 603 637 IPR001736 GO:0003824
Trre14g01959 1090 Pfam Phospholipase D Active site motif 937 963 IPR001736 GO:0003824
Trre14g01959 1090 Gene3D Endonuclease Chain A 482 716 - -
Trre14g01959 1090 FunFam Phospholipase D 749 982 - -
Trre14g01959 1090 MobiDBLite consensus disorder prediction 90 122 - -
Trre14g01959 1090 FunFam Phospholipase D delta 478 716 - -
Trre14g01959 1090 SUPERFAMILY Phospholipase D/nuclease 480 702 - -
Trre14g01959 1090 Pfam C2 domain 277 402 IPR000008 -
Trre14g01959 1090 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01959 Trre-Chr14 18154526 18160366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01959 42 1090 Phospholipase D Gene Family (Wang group) AT2G42010 67.523 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01959 K01115 - gmx:100801286 1798.1