Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g01959 | ATGGATAATAACTATGGTTCATCATCATCTTCTCCATATCGATATCCAAACCCTTATATGTATCCCCCTAACCCTAACCCTAACCCTAACCCTCATCAACCATATCCACCTCAAGATCCCTATGCACATTCTCATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCATTCAACTATTCCTATCCTAGACCATACCCTCCTCCTCCTCCTCCTCAATTAGTACCCTCTTATCCTTATCCTCCATACCATGTTCCTCAAGGAACTCATAATCCTACTCAACCTTCCCTTTCACACCATGCTAGCTTATTACAGCATGGATCATCCTCTCATCATTATTATTATCAACAAAATACAACTTCTCATGAAGATCGTCCCGATGCTCATTCGCGACATAATAGCTTCTCTGGTCCTTATTGGCATGAGACATCAAGTTCAACAGGTGGTGGTGGTGGTGGAGTATCACAAACTAGTGGTGCTGGTGGTGGTGATAATTCCAGGCCTTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGATAGTCAGGCAACTTCTCCTGCGGCGCCTCCTGCTGTTGCAGCTCAACCTTTTATGCATTCGATATCGGTACCGAAGATGCAACAGAAGAAGGATGATTTTTATGGATATTCGAATAACTCGTTCTCGGGTTATGGGTCCTCGTACCAGAATCGGGTTAACTCGGGTAGATTTTCGGATTTTTCTGGTTCGTTTAATGACTCGATGTATAATCAGAGCTTGCAGGTTGTTCCAGTGCAGAATAAAGGGTCATTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCGAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGCATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCCGTAATTGGGAGGACTTTTGTCATTAGCAACTCTGAAAATCCTGTTTGGAGTCAGCATTTTTATGTTCCTGTTGCACATTACGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGTATTGTAGCGATTCCAGTGGAACAAATATACTCAGGAGAGATAGTTGAAGGAGCTTACTCTGTCCTGAATAGTAATGGGAAACCTTGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGAAACTAAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATCGGAGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCTGATGGAAGCCTCCCTAATGTTTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATCTTTGATGCCATAAGTCAAGCTCGGCGCTTGATTTATATTACAGGTTGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGAGATGGCGGTTATGCATCAGATTATACCTTGGGTGATCTCCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCAACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCACGATGAGGAAACTAGACGGTTTTTCAAGCACTCGTCAGTCCATGTACTGCTTTGTCCCCGCATAGCTGGAAAACGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATACACACATCATCAGAAAACTGTAATTGTGGATGCGGATGCTGGAAATAACAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCACCACCCTCTCTTTAAGACATTACAGACAATACATAAGGATGATTATCACAACCCCACTTTCACGGGTAACACGGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTCTTAACAAACTTTGAGGAGCGGTGGTTAAAAGCTTCAAAACCGCATGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTTAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGACGATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGCGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATCGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAAGACCTCGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGTGCTGCCACACAAAGGATTCTCTTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGGGAGGCCATAAATCTGTACGAAAATGTCAATGTGTCAGGGAATCCTCCCCAAGCAAATACTCCACAAGCAAATAGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATCGTGGGATCCGCAAACATTAACCAACGGTCTATGGAAGGAACAAGGGACAGTGAGATTGCTATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACAGTCTTGTCCACATGGACAAATACATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTAATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAGGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGAAAATGAAGTAACAGAAATGAGAGGGCATCTACTAAAATACCCTGTAGATGTAGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCATGAAGAGTTCCCTGATGTAGGAGGAAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA | 3273 | 0.4134 | MDNNYGSSSSSPYRYPNPYMYPPNPNPNPNPHQPYPPQDPYAHSHAPPYPYPYISSHSFNYSYPRPYPPPPPPQLVPSYPYPPYHVPQGTHNPTQPSLSHHASLLQHGSSSHHYYYQQNTTSHEDRPDAHSRHNSFSGPYWHETSSSTGGGGGGVSQTSGAGGGDNSRPSAYPRLDDLMNNVRLSDSQATSPAAPPAVAAQPFMHSISVPKMQQKKDDFYGYSNNSFSGYGSSYQNRVNSGRFSDFSGSFNDSMYNQSLQVVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMHKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHYAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEIVEGAYSVLNSNGKPCKQGAVLSLSIQYIPMEKLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDGGYASDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINLYENVNVSGNPPQANTPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSCPHGQIHGYRMSLWAEHTGTINDCFLQPESLECVRRVRAIGEMNWKQFAENEVTEMRGHLLKYPVDVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI | 1090 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 137 | 165 | - | - | |
Trre14g01959 | 1090 | SMART | pld_4 | 936 | 963 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | SMART | pld_4 | 602 | 637 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | CDD | C2_plant_PLD | 272 | 424 | - | - | |
Trre14g01959 | 1090 | SUPERFAMILY | Phospholipase D/nuclease | 782 | 1022 | - | - | |
Trre14g01959 | 1090 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 275 | 425 | IPR035892 | - | |
Trre14g01959 | 1090 | ProSiteProfiles | C2 domain profile. | 255 | 401 | IPR000008 | - | |
Trre14g01959 | 1090 | PANTHER | PHOSPHOLIPASE D | 267 | 1081 | IPR015679 | - | |
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 78 | 174 | - | - | |
Trre14g01959 | 1090 | Gene3D | C2 domain | 272 | 412 | IPR035892 | - | |
Trre14g01959 | 1090 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 936 | 963 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | FunFam | Phospholipase D delta | 272 | 419 | - | - | |
Trre14g01959 | 1090 | Gene3D | Endonuclease Chain A | 748 | 986 | - | - | |
Trre14g01959 | 1090 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 602 | 637 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | SMART | C2_3c | 278 | 400 | IPR000008 | - | |
Trre14g01959 | 1090 | Pfam | Phospholipase D C terminal | 1011 | 1080 | IPR024632 | - | |
Trre14g01959 | 1090 | Pfam | Phospholipase D Active site motif | 603 | 637 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | Pfam | Phospholipase D Active site motif | 937 | 963 | IPR001736 | GO:0003824 | |
Trre14g01959 | 1090 | Gene3D | Endonuclease Chain A | 482 | 716 | - | - | |
Trre14g01959 | 1090 | FunFam | Phospholipase D | 749 | 982 | - | - | |
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 90 | 122 | - | - | |
Trre14g01959 | 1090 | FunFam | Phospholipase D delta | 478 | 716 | - | - | |
Trre14g01959 | 1090 | SUPERFAMILY | Phospholipase D/nuclease | 480 | 702 | - | - | |
Trre14g01959 | 1090 | Pfam | C2 domain | 277 | 402 | IPR000008 | - | |
Trre14g01959 | 1090 | MobiDBLite | consensus disorder prediction | 16 | 47 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g01959 | Trre-Chr14 | 18154526 | 18160366 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g01959 | 42 | 1090 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 67.523 | 0.0 | 1437 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g01959 | K01115 | - | gmx:100801286 | 1798.1 |