Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01958 ATGTTAGATGTGTTTATTTCTTATCCTCAAAACATTTTTTCCTTGTCTTGTGCTAAGTCCAACATAGGCACCATGATGTTTAGTTTTCTATTTCTTGCTCTTTTGGCGACAAATTCAATGGCTCTTGCGGCGCAGCAAACATATATAGTACACATGGACAAAACCAAAATTGAAGCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTCTGAATCAATCATTGATTTCATTTCTCAAGCTTCAAAAGAAGAAGAACAAGAAGAAGCTGAGATTTTATCACCTCAGCTTTTATATGCTTATGAAACCAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAACTTAAACACTTAAACCAAGTTGATGGTTTCCTTTCAGCTATACCTGATGAACTTTTAACCCTTCACACAACATACACACCACATTTTCTTGGCCTAACTAGGGGAAAAGGACTTTGGAGTGCTCCGAATTTGGCCTCTGATGTTATCATCGGTGTCCTTGATTCCGGAATATGGCCTGAACACGTCAGTTTCAAAGACTCCGGCTTTTCTCCGATACCTCCTAAATGGAAAGGTATTTGTGAAAATGGCACCAAATTCTCGTCCTCAAACTGTAACAAGAAACTCATTGGTGCAAGATACTATTTTAGAGGGTACGAAAAAGTCATCGGAAAAATCAATGAAACAACTGAATATCGTTCTGCTAGAGACTCTCAAGGTCATGGAACACACACTGCCTCGACTGCAGCCGGTAATGTGGTTCAAAAAGCAAGCATTTTTGGACTTGCTAAAGGCTCAGCAAGTGGAATGAGGTATACTTCAAGAATTGCGGCGTATAAAGTGTGTTGGCTTTCTGGCTGTGCAAATTCGGACGTATTAGCAGCGATGGACCAAGCAGTTTCTGATGGTGTTGATGTACTTTCACTCTCTTTAGGAAGTATTCCAAAACCATTTTTTAATGATAGTATTGCTATAGCTTCATTTGGAGCAACAAAAAACGGCGTCTTTGTTTCTTGCTCCGCAGGCAACTCAGGCCCTTTTGCATCAACAGTTGGAAACGGCTCGCCATGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACAAAAGTCAAACTCGGAAACTCAAAAACTTTTGAAGGCACATCTTTGTACCAAGGTAAAAATCAAACAAACCAACAATTTCAACTTGTGTATGGAAAAACAGCAGGTAAAAAGAGAGAAGCAGTGTTTTGCACAAAAAACTCACTTGATAAAAAACTTGTTTTCGGAAAAATCGTTGTTTGCGAAAGAGGAATCAATAGCAGAACAGAAAAAGGAGAGGAAGTGAAAAAATCAGGTGGATATGGAATGATACTACTTAACTCGGAAAATCAAGGTGAAGAGCTTCTTTCTGATGCTCATGTTTTACCAGCTACTTCATTAGGTGCTTCAGCAGGTAAAATCATTAGAACCTACATTAACACTGTTAAAAAACCAACAGCTTCATTTTCATTTCTCGGAACAAGATACGGACATGTTAATCCAGAAAGTGCTTCTGATCCTGGACTAGTCTATGATATTAACACTAATGACTATTTGAATTACTTTTGCAGCCTTAATTTTACTTCTTCAGAGATTACAATATTGACAAAAACCAACTTCAAATGTTCTAAGAAACCACTTTTCCAAGTTGGTGACTTAAACTATCCTTCATTTTCTGTTTTGCTTAGTAGAAAAGTACATAATGTGACATACAAAAGAGTTGTTACAAATGTTGGTAAATCAAAAAGTGCTTATTATGATGTTAAAGTTGAACAACCTAATGGTGTTTTAGTTAATGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTAAGCTATAAAGTTACATTTTTAGCAGTTGGAAAAACAAGAGTTATTGGCACTTCATCATTTGGATCACTCATTTGGGTATCTGGCAAATATAAGGTTAGAAGTCCTATTGCAGTGACATGGCAATAG 2007 0.3727 MLDVFISYPQNIFSLSCAKSNIGTMMFSFLFLALLATNSMALAAQQTYIVHMDKTKIEASIHSQDSTKPWSESIIDFISQASKEEEQEEAEILSPQLLYAYETNMFGFAATLSEKQLKHLNQVDGFLSAIPDELLTLHTTYTPHFLGLTRGKGLWSAPNLASDVIIGVLDSGIWPEHVSFKDSGFSPIPPKWKGICENGTKFSSSNCNKKLIGARYYFRGYEKVIGKINETTEYRSARDSQGHGTHTASTAAGNVVQKASIFGLAKGSASGMRYTSRIAAYKVCWLSGCANSDVLAAMDQAVSDGVDVLSLSLGSIPKPFFNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGSPWIMTVAASYIDRTFPTKVKLGNSKTFEGTSLYQGKNQTNQQFQLVYGKTAGKKREAVFCTKNSLDKKLVFGKIVVCERGINSRTEKGEEVKKSGGYGMILLNSENQGEELLSDAHVLPATSLGASAGKIIRTYINTVKKPTASFSFLGTRYGHVNPESASDPGLVYDINTNDYLNYFCSLNFTSSEITILTKTNFKCSKKPLFQVGDLNYPSFSVLLSRKVHNVTYKRVVTNVGKSKSAYYDVKVEQPNGVLVNVEPRKLKFEKLGQKLSYKVTFLAVGKTRVIGTSSFGSLIWVSGKYKVRSPIAVTWQ 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01958 668 Gene3D - 369 503 - -
Trre14g01958 668 SUPERFAMILY Subtilisin-like 137 400 IPR036852 GO:0004252|GO:0006508
Trre14g01958 668 CDD PA_subtilisin_like 376 501 - -
Trre14g01958 668 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 138 IPR037045 -
Trre14g01958 668 Gene3D Peptidase S8/S53 domain 163 368 IPR036852 GO:0004252|GO:0006508
Trre14g01958 668 ProSiteProfiles Serine proteases, subtilase domain profile. 143 668 - -
Trre14g01958 668 Pfam Fibronectin type-III domain 565 665 IPR041469 -
Trre14g01958 668 FunFam Subtilisin-like protease SBT1.5 535 668 - -
Trre14g01958 668 Pfam Subtilase family 162 400 IPR000209 GO:0006508|GO:0008236
Trre14g01958 668 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 166 177 IPR023827 -
Trre14g01958 668 Gene3D - 535 667 - -
Trre14g01958 668 Pfam PA domain 402 487 IPR003137 -
Trre14g01958 668 CDD Peptidases_S8_3 135 366 IPR034197 -
Trre14g01958 668 PRINTS Subtilisin serine protease family (S8) signature 239 252 IPR015500 -
Trre14g01958 668 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Trre14g01958 668 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 509 IPR045051 -
Trre14g01958 668 Pfam Peptidase inhibitor I9 47 138 IPR010259 -
Trre14g01958 668 FunFam subtilisin-like protease SBT1.5 369 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01958 Trre-Chr14 18148657 18151561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01958 511 668 Subtilisin-like Serine Gene Family AT1G01900 53.416 3.63e-41 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01958 - - lja:Lj0g3v0335989.1 788.875