Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01952 ATGAGATTATGTGAGAAAGTTATTTTGAGCGATGATGAGAAAGCGATTTTGAATTCACATAATCGGAAACGATTATGTGAGAAAGCGATTTTGAGAAGTGAGAAATCAATTATAAGAGAAGTGATTTTGAGAAGTGTGAGAAGTGAGAAAGCGATTATCATTGGCAAAACTCTTGAACGATATCAGAGATGCTCTTTTACTTCTCAAAATGATAATGATAATGAACATGAAACTCAGAATTGGTACCAAGAAATGTCAAAACTAAAGGCAAAGTATGAGTCACTTCAAAAGTCACAAAGGCAATTGCTAGGGGAAGATCTTGGACCACTGAATATAAAAGAGCTACAAAATCTTGAGAAGCAACTTGAAGGAGCTTTAGCACAAGCTAGGCAGAGGAAGACACAAATTATGATCGAACAAATGGAAGAGTTTAGGAAAAAGGAACTCCACCTTGGAGAAATAAATAAGCAACTTCGATTCAAGCTTGAATCAGATGGATTTAATCTGAAAGCATATGATAGCATGTGGAACTCTAATAATTCTGCTACTGTTGCTGGAGGAAGCAACTTTCCTTTTCAGCATTCTGAAAACAATCCCATGGATTGCCAAGCTGAACCTTTCTTGTACCAAAACTATGTTCAAGCTGAACAATCCAGTGCTCCAAAGAATATGGTTGGTGAGACTAGCTTTATCCAAGGATGGATGCTTTGA 711 0.3671 MRLCEKVILSDDEKAILNSHNRKRLCEKAILRSEKSIIREVILRSVRSEKAIIIGKTLERYQRCSFTSQNDNDNEHETQNWYQEMSKLKAKYESLQKSQRQLLGEDLGPLNIKELQNLEKQLEGALAQARQRKTQIMIEQMEEFRKKELHLGEINKQLRFKLESDGFNLKAYDSMWNSNNSATVAGGSNFPFQHSENNPMDCQAEPFLYQNYVQAEQSSAPKNMVGETSFIQGWML 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01952 236 Coils Coil 85 105 - -
Trre14g01952 236 Coils Coil 112 135 - -
Trre14g01952 236 ProSiteProfiles K-box domain profile. 78 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre14g01952 236 Pfam K-box region 73 162 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01952 Trre-Chr14 18029446 18031960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01952 51 236 MADS-box Gene Family AT2G45650 51.795 6.49e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01952 K09264 - tcc:18614251 241.121