LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g01948	ATGGCGTTGTATCTTACTATACTCGCACTATTCACCACCATCTCCGCTGCTTCCGCCGCAACCAGTTACAAAAACTACACCGTAGGTGGCACCGCCGGATGGTTTTTCAACTCCACTACCAACACTTCCGCCACAAATTACTCTTCTTGGGCGTCTACTCAAACTTTTAACCTCGGCGATTATCTCATTTTCAACACGAATTCAAACCAGAGCGTGATTCTTACATACAACAAAACCGCTTACTTGAACTGCTCAGCCGATGATTCAGACAACGAAACATCGATATACAGCGGTGTACCCGATGATTCCGGCAAACCGTTGACTATTTCTGTTCCGTTGACTATTGTGGGATCCAACTACTTCTTCTCCGATTACAATGAAGGTCTTCAATGTCAACAAGGTTTAGCATTTCAGATCCAAGTCCAGCGTGGAATTGGCTTGCCACCGAGTCTCAACCAGCCTCCTCCTCCGCCGTATATTGAGCCGCCTGGTCCTGATAGTGCTGAATCTCCGTCGGTTACGGTGCCACAGACACCTAATAGTGGCGCGTTTGCTAACCGCGCCGACGTATGTGTGGCGGTTTACGGATTCGGTGTTGCACTGGTATTGCTGCAATTGCAATTTTGGTAA	630	0.4794	MALYLTILALFTTISAASAATSYKNYTVGGTAGWFFNSTTNTSATNYSSWASTQTFNLGDYLIFNTNSNQSVILTYNKTAYLNCSADDSDNETSIYSGVPDDSGKPLTISVPLTIVGSNYFFSDYNEGLQCQQGLAFQIQVQRGIGLPPSLNQPPPPPYIEPPGPDSAESPSVTVPQTPNSGAFANRADVCVAVYGFGVALVLLQLQFW	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g01948	209	FunFam	Early nodulin-like protein 18	23	144	-	-
	Trre14g01948	209	SUPERFAMILY	Cupredoxins	24	142	IPR008972	-
	Trre14g01948	209	Pfam	Plastocyanin-like domain	42	134	IPR003245	GO:0009055
	Trre14g01948	209	ProSiteProfiles	Phytocyanin domain profile.	24	143	IPR003245	GO:0009055
	Trre14g01948	209	PANTHER	BLUE COPPER PROTEIN	23	158	IPR039391	GO:0009055
	Trre14g01948	209	MobiDBLite	consensus disorder prediction	147	178	-	-
	Trre14g01948	209	Gene3D	-	22	143	IPR008972	-
	Trre14g01948	209	MobiDBLite	consensus disorder prediction	149	165	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g01948	Trre-Chr14	17982151	17982900	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g01948	5	176	Phytocyanin Superfamily	AT1G08500	37.912	1.32e-32	115

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g01948	-		-	psat:127127184	275.404