Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01944 ATGGAGTACCAAATTCTTCTAATTGTGATTATATGTGCAAGCATTTTCATCTTCATTTTTAGAAAATTAAACCAAACTAAAAAATCTACAAAACTTCCACCAGGGCCACACCCACTTCCCATCATTGGAAACATCTTAGAACTTGGCAAAAATCCACACAAGACACTCACAAAACTCTCTCAAATCTATGGACCAATCATGACACTAAAACTAGGAGCGATAACAACCATAGTAATCTCATCACCACAACTAGCCAAACAAGTCTTACATGAAAATTCTCAAATATTTTCTAATAGAACTGTCCCACATGCAATTTGTGCAGTGGATCATAACAAATTTTCAGTTGGGTGGGTTCCAACTTTAGCTTTGTGGAAGAAACTAAGAAAAGTTTGTGCTACAAAAGTATTTTCTACAAAAATGCTTGACTCAACAAAAATCCTTTGCCAACAAAAGTTGCAAGAATTATTGGATTATGTGAATGAAAAATCCAAGAAATGTGAGGTTTTTGATATTGGTGAGGTTGTTTTTACAACTGTCCTTAATTCAATTTCAAACACTTTATTTTCTATGGATTTGGCTCATTCCACACCTGATGAAAAGTCTCAAGAATTTAAGAACATTATTTGGGGTATCATGGAAGAAGCTGGTAAGCCTAATATTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAGGTTTGTATGGAAGAATGACCAATCATATGAAGAAGTTGTGTGAGATTTTTGATGGAATTATTGAAGATAGAATTAGTTCAAGAGCTTCCAAAGTTGATTATGAGGATTGCAATGATGTGTTAGATTCACTTCTTAATAACAATAACAATATTGAAGAAACCACTTTTAAATTGAGTCGCAATGAGATGGTGCATCTATTCCTGGACTTATTTGTTGCTGGGATTGACACAACATCAAGTATAATTGAATGGATTTTGGCAGAGCTACTACGCAACCCTGATAAATTAACAAAAGCAAGAAAGGAGTTATGTCAAATAATTGATAAAGATGAAACAATTGAAGAATCACATATTTCTAAGTTACCTTTCTTACAAGCGGTTGTGAAGGAAACATTGAGATTGCACCCACCAATTCCATTATTGCTACCTCACAAGTGTGATGAAAATGTGAACATATTAGGTTTCAATGTGCCAAAAAATGCACAAGTATTAGTCAATGTGTGGGCGATGGGAAGAGATCCAACCATTTGGGAAAATCCAAATATATTCATGCCCGAAAGATTTTTGGAGTGTGACATTAATTATAAGGGTAATAATTTTGAACTTATACCCTTTGGAGCTGGCAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTGCACATTTGATGGTGGCCTCCCTTCTACACAAATTTGAATGGAATCTTGCTGATGGACTAATGCCACAACACATGAACATGGATGAACAATTTGGATTAACTTTAAAAAGGGTTCAATTTCTTCGAGTTCAAGCTATTTCATTAGCTTAG 1512 0.3466 MEYQILLIVIICASIFIFIFRKLNQTKKSTKLPPGPHPLPIIGNILELGKNPHKTLTKLSQIYGPIMTLKLGAITTIVISSPQLAKQVLHENSQIFSNRTVPHAICAVDHNKFSVGWVPTLALWKKLRKVCATKVFSTKMLDSTKILCQQKLQELLDYVNEKSKKCEVFDIGEVVFTTVLNSISNTLFSMDLAHSTPDEKSQEFKNIIWGIMEEAGKPNISDFFPILRPLDPQGLYGRMTNHMKKLCEIFDGIIEDRISSRASKVDYEDCNDVLDSLLNNNNNIEETTFKLSRNEMVHLFLDLFVAGIDTTSSIIEWILAELLRNPDKLTKARKELCQIIDKDETIEESHISKLPFLQAVVKETLRLHPPIPLLLPHKCDENVNILGFNVPKNAQVLVNVWAMGRDPTIWENPNIFMPERFLECDINYKGNNFELIPFGAGKRICPGLPLAHRTAHLMVASLLHKFEWNLADGLMPQHMNMDEQFGLTLKRVQFLRVQAISLA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01944 503 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 CDD CYP76-like 60 497 - -
Trre14g01944 503 Coils Coil 267 287 - -
Trre14g01944 503 Pfam Cytochrome P450 33 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 500 - -
Trre14g01944 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre14g01944 503 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01944 503 FunFam Cytochrome P450 76C4 24 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01944 Trre-Chr14 17922145 17925530 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01944 5 495 Cytochrome P450 AT2G45550 46.169 7.58e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01944 - - cam:101504674 748.043