Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01904 ATGAGAATTCCAGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTCTTGCTAGAGCTACTGACCCTGTTTATGGTTGTGTGGCTCATATTTTTGCTCTTCAACAACAGGTTGTGGAGTTACAAGCAGAGTTGGCCTATGTACAAGCCCGTCTTTCAATATTGAATCGAATCTCTCAAGATCCTCAATTTCAACAGCCTCAAAATTCTTCAATATCCCCAACTATGCATTCCTCATTACTTCATCATTTGTCATCAAACAATGAAACTTCTTACACGTCCATGCAAAATCATCATCCAATACCTTTTGAATTAAGCAACTTTCACAATAATAATCCATCATACTATTCCTATCATCAACAACTCAATGATCAAGAACTCCAAGCTAATTTGCCTCGAGAATTTTAG 417 0.3717 MRIPVHKRLDAVVTLCYEALARATDPVYGCVAHIFALQQQVVELQAELAYVQARLSILNRISQDPQFQQPQNSSISPTMHSSLLHHLSSNNETSYTSMQNHHPIPFELSNFHNNNPSYYSYHQQLNDQELQANLPREF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01904 138 ProSiteProfiles LOB domain profile. 1 55 IPR004883 -
Trre14g01904 138 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 105 - -
Trre14g01904 138 Pfam Lateral organ boundaries (LOB) domain 2 52 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01904 Trre-Chr14 17563213 17565627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01904 1 70 AS2 family AT2G45410 67.606 3.23e-27 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre14g01904 LOB 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01904 - K21994 mtr:11426685 207.994