Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01890 ATGGCTGCTTGTGCTTTGTTCAATGGTGGTGGTGGTGGTGGTGGAGGTGGGAATAGTGATGAAACTAATTTGAGCAACAACAACAACAATAATAGTACTGCTTCTAACTCTAGCAACATAAGTAGTGAAGATTTACACCACAACATGCTTCAAACACAACCTCATCATTCTGAAAGAAAATTGCTTAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACTTCATAACAACTCTTCTGATTATCATAGATTTCCTCGTCGCAACAACAACAACAACATATCCTCATTGAATTGCTCTTTACCTTCAACCACACAAAAGGGTGTCACAACAACAACAACAACAACATCATTAACCGCAGATAACGTTTGTATTCAAAATTACCCCACTGTATCCGTCACAACCAACTACTCCACTATGTTGCTACCTTCATCTTCCAACAATCTCAACAATTCCTCAAACTACACTCATTTTCAACAACCACTTGTAGAAGAACAAAACCCTCTTCCTACAATCTGTGGATTCTCTGGTTTACCACTTTTTCCATCTCAAAACCAAAACAACAACGTTAACAGAAACATAAACATAACTTCTGCAGCTGCTGCTAATATTGTTGATGTTGTTTCACCTTCTATGATGGAAGAAACCTCAGCTACAACAAATTGGATTGATGGTATTCTCAAAGATCTTATTCATAGTTCTAATAGTGTTTCCATTTCTCAACTTATCAACAATGTTAGAGAGATTATATATCCTTGTAATCCAAACCTTGCTCTTGTTCTTGAACATAGACTTCGTCTTTTGACTGAAACTACACCACAAAACTGTTCTGTTGTTGTTACAGACAGAAAAAGAAACAACACAGAACAACAACAAAGTGTTGTTAATGTTAATGTTTTAGCAGCTCCTAATGTTAATTCCTCGGTGAAACTTATGAATCGTGTTGATGACATTGTTCAAACAAGTTTACATTTTTCTGATACATCACATGTTCTGAATCAAAATCAAAACATTTTTCCTAATTGGGTTGTGCCTCAAAATCAAATCAACAACAATAACAACAACAACCCTTCAGTTTCATTGGTTACTTTACCTTCACCACAACCACAACAAGATCAACAACAACATCAAGAACATCATCATCAAGAAGATCTTACACCTGCAAGAACAGCAGAAGCTACTTCTGCTGAGTTGGCACTAACAAGAAAGAAGAAAGAGGAGATTAAAGAACAGAAGAAGAAAGATGAAGAAGGTTTACACCTTCTAACACTACTTCTTCAATGTGCAGAAGCTGTATCAGCAGAGAATCTAGAACAAGCAAACAAGATGTTACTCGAGATATCGCAGCTGTCGACGCCTTTCGGCACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCAATTTCAGCAAGACTAGTGAGTTCATGTTTAGGAATCTACACAACACTTCCACCACACATTACACCACATAATCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGAATCAGCCCATTTGTGAAATTCTCTCATTTCACTGCTAACCAAGCTATACAAGAAGCTTTTGAAAGAGAAGAAAGAGTTCACATCATAGATCTTGATATAATGCAAGGTTTACAATGGCCTGGTTTATTTCATATCCTTGCTTCGAGACCGGGTGGACCGCCTTATGTGAGACTCACTGGATTAGGTACTTCCATGGAAACACTTGAAGCTACTGGTAAACGTTTATCTGATTTTGCATCTAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAAAAAGTTGGAAACATTGATCCTGAGAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACGGTAGTGGAACAAGATTTAAGCAATGCAGGTTCATTTTTAGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCACTATTTGATTCTCTTGGTTCAAGCTACGGTGAAGAGAGTGAAGAGAGACATGTGGTGGAGCAACAGCTATTATCAAGAGAGATTCGTAATGTACTTGCAGTTGGAGGACCATCAAGGAGTGGTGAAATAAAGTTTCATAATTGGAGAGAAAAACTTCAACAGTGTGGCTTTAGAGGTATATCTTTGGCTGGTAATGCTGCTACTCAAGCTAGTCTTCTTCTTGGCATGTTCCCTTCTGAAGGGTATACTTTAGTTGAGGATAATGGTATCCTTAAACTTGGTTGGAAAGATCTTTGTTTGCTTACTGCTTCTGCTTGGAGACCTCCCTTTCATACCAACAATGTCATTCCACATCATAACTAA 2376 0.3775 MAACALFNGGGGGGGGGNSDETNLSNNNNNNSTASNSSNISSEDLHHNMLQTQPHHSERKLLRKRMASEMELQLHNNSSDYHRFPRRNNNNNISSLNCSLPSTTQKGVTTTTTTTSLTADNVCIQNYPTVSVTTNYSTMLLPSSSNNLNNSSNYTHFQQPLVEEQNPLPTICGFSGLPLFPSQNQNNNVNRNINITSAAAANIVDVVSPSMMEETSATTNWIDGILKDLIHSSNSVSISQLINNVREIIYPCNPNLALVLEHRLRLLTETTPQNCSVVVTDRKRNNTEQQQSVVNVNVLAAPNVNSSVKLMNRVDDIVQTSLHFSDTSHVLNQNQNIFPNWVVPQNQINNNNNNNPSVSLVTLPSPQPQQDQQQHQEHHHQEDLTPARTAEATSAELALTRKKKEEIKEQKKKDEEGLHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYTTLPPHITPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFASKLGLPFEFFPVAEKVGNIDPEKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNNVIPHHN 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01890 791 Pfam GRAS domain family 421 778 IPR005202 -
Trre14g01890 791 MobiDBLite consensus disorder prediction 344 372 - -
Trre14g01890 791 ProSiteProfiles GRAS family profile. 411 778 IPR005202 -
Trre14g01890 791 MobiDBLite consensus disorder prediction 18 41 - -
Trre14g01890 791 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 389 773 IPR005202 -
Trre14g01890 791 Coils Coil 390 410 - -
Trre14g01890 791 MobiDBLite consensus disorder prediction 7 41 - -
Trre14g01890 791 MobiDBLite consensus disorder prediction 344 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01890 Trre-Chr14 17400528 17403609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01890 401 779 GRAS Transcription Factor Family AT3G54220 85.564 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g01890 GRAS 2.7e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01890 - - gmx:100806779 917.916