Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01859 ATGATTGATGAAGGCTCTGATGATCAAGGACATGCTAGTGCTGATGAGATTGAGGAAGGTGCTGAAAATATGATGACTGAAGCTGTTCAGAAGGAAAAGCGGACAAAGAAAAGGCATGATAGGCCTTCAGCTTCTGAGGAAGATCAGAACCCTGCTAAACCTGCAAAGAGATTAAAGACCAGAGCTTCTAAACCAAAAGGTAAGATCTCTGAATCTAATACTTCTAGCATTCCTGTAGCTCAGGGCCAAGGTCTTGGTAAAACTCTTGTGGAGAAACTGATTCGAGCTCTTTTGCAAAGGGACATCGGTAATATAACTTTGTTTGCAGATAGTAAAGTTGTGGAATTTTATCGCAATTTAGGTTTTGAAGCTGATCCGGAGGGCATAAAAGGCATGTTCTGGTACCCAACTCAATGA 417 0.4149 MIDEGSDDQGHASADEIEEGAENMMTEAVQKEKRTKKRHDRPSASEEDQNPAKPAKRLKTRASKPKGKISESNTSSIPVAQGQGLGKTLVEKLIRALLQRDIGNITLFADSKVVEFYRNLGFEADPEGIKGMFWYPTQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01859 138 CDD NAT_SF 78 107 - -
Trre14g01859 138 MobiDBLite consensus disorder prediction 1 81 - -
Trre14g01859 138 MobiDBLite consensus disorder prediction 25 55 - -
Trre14g01859 138 MobiDBLite consensus disorder prediction 67 81 - -
Trre14g01859 138 Gene3D - 77 135 - -
Trre14g01859 138 MobiDBLite consensus disorder prediction 1 18 - -
Trre14g01859 138 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 78 127 IPR016181 -
Trre14g01859 138 PANTHER ACYL-COA N-ACYLTRANSFERASE 79 136 IPR045039 GO:0008080
Trre14g01859 138 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 78 138 IPR000182 GO:0016747
Trre14g01859 138 Coils Coil 14 34 - -
Trre14g01859 138 Pfam Acetyltransferase (GNAT) domain 79 125 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01859 Trre-Chr14 17056731 17062255 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre14g01859 Acetyltransf_10 3.9e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01859 K22450 - sspl:121799307 114.39