Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01852 ATGCTACAAACACAATCCTATTTGGTTACTATACACATTTTCTTATTACTACTACTTGTGTTTCCTCAAACTAAATCTGATCTAAATTCAGAAAAGCAAGCATTACTTGATTTTGTTGCTGCATTACATCATGGTGAAAAACTCAATTGGAGTTCCAATACTTCAATATGCACTTCTTGGATAGGAGTTAAATGCAATCCTAAGTGCTCTCATGTTCACTCCGTGCGCCTTCCGGGCATTGGATTGCGCGGTTCTCTCCCCGAAAACACGCTCGGTAAGCTATATGGTTTAATCAGTCTAAGTCTTAGGTCTAATAGCTTGAGTGGAAACCTTCCAAGTGACATATTTTCAATTCCTTCTCTAAGATTCATTTATCTTCAACATAACAATTTTTCGGGTCATATTTCCGATTATTTACCACCCCATCTTATGTTTCTTGATTTGTCCTATAACTTTTTCACCGGAAAAATTCCAAGCATAATCCAAAACTTGACATATCTTATAGGACTAAACCTTCAAAATAACTCTCTCATAGGACCTATTCCAAATGTTATTGTTGAGCTTCCTAATCTTAAGAATTTGGATTTGAGCTTCAACTATTTGAATGGCTCAATCCCCTCAGGGCTTCATAAGTTTCATGCATCATCATTTAAGGGTAATCTAGGATTATGTGGTGCACCTTTGAAACAATGTTCTTTAGATTCTTCCCCTACTACTATTTTGTCTCCACTAATAGTCTCACAAAAAGTACCTAATGATATCTCAAACAAGAAACTAAGTACATGGGGAAAAATTGCTATATCTTTGGGAGTTTTTGCAGCTTTGCTTCTACCAGCTCTTGTAGTAGTGTTCTGTTGTTTCAAGAAAAAAGTAGGTGAACAAAATGTAGTAACTAAAGAGAAGAGTGAGAAGCTTATGGAAGAATTTGGAAGTGGTGTGCAAGAAAATGAGAAAAATAAGTTAATATTTTTTGAAGGGTGTTCTTATAATTTTGATCTTGATGATTTGTTAAGAGCTTCTGCTGAAGTGCTTGGTAAGGGAAGTTGTGGAACAACTTATAAAGCTATTTTGGAAGAAGGGACAATAGTGGTTGTGAAGAGATTAAAAGAAGTGGCAGTGGTTAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGGCTTAATCATCATCCAAATGTAGTTCCACCAAGTGCTTACTATTATTCAAAGGATGAAAAATTGATTGTTTATGATTATTTCACATCTGGCAGCTTTTCCAAGTTATTGCATGGAACAGGTGAAACTGCACGAACTCGACTAGATTGGGATTCAAGATTGAAGATAATGGCTGGAGCTGCTAAGGGCATTGCCCATATCCACTCAGCAAATGGAAGGAAACTTGTCCATGGCAACATAAAATCATCCAATGTGCTTCTCTCAATAGATCTTCAAGGCTGCATATCAGATTTTGGCCTAACACCTCTAACAAGTTTATGTGTCTCCCCCAGAAGTCCTCCAGGGTACCGAGCACCGGAGGTGAACGAAAGCAGAAAATTCACTCAAAAATCTGATGTATACAGCTTTGGTGTTCTTCTTCTTGAGATGCTGACAGGGAAAACACCAGTTCAGTATTCAGGTCATGAAGATGTGGTTGATCTTCCAAAATGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATGTTGAGCTAATGAGATATTCAAACATTGAAGAAGAACTTGTGCAGATGTTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACACAAGACCTTCAATGGAAGAAGTTGTTAGGATGATTGAAGACATAAGAGGATCCATTTATTAA 1845 0.3734 MLQTQSYLVTIHIFLLLLLVFPQTKSDLNSEKQALLDFVAALHHGEKLNWSSNTSICTSWIGVKCNPKCSHVHSVRLPGIGLRGSLPENTLGKLYGLISLSLRSNSLSGNLPSDIFSIPSLRFIYLQHNNFSGHISDYLPPHLMFLDLSYNFFTGKIPSIIQNLTYLIGLNLQNNSLIGPIPNVIVELPNLKNLDLSFNYLNGSIPSGLHKFHASSFKGNLGLCGAPLKQCSLDSSPTTILSPLIVSQKVPNDISNKKLSTWGKIAISLGVFAALLLPALVVVFCCFKKKVGEQNVVTKEKSEKLMEEFGSGVQENEKNKLIFFEGCSYNFDLDDLLRASAEVLGKGSCGTTYKAILEEGTIVVVKRLKEVAVVKKEFEQQMEIVQRLNHHPNVVPPSAYYYSKDEKLIVYDYFTSGSFSKLLHGTGETARTRLDWDSRLKIMAGAAKGIAHIHSANGRKLVHGNIKSSNVLLSIDLQGCISDFGLTPLTSLCVSPRSPPGYRAPEVNESRKFTQKSDVYSFGVLLLEMLTGKTPVQYSGHEDVVDLPKWVQSVVREEWTAEVFDVELMRYSNIEEELVQMLQLAMACVAVMPDTRPSMEEVVRMIEDIRGSIY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01852 614 Gene3D Phosphorylase Kinase; domain 1 304 413 - -
Trre14g01852 614 FunFam pollen receptor-like kinase 1 306 413 - -
Trre14g01852 614 SUPERFAMILY L domain-like 48 212 - -
Trre14g01852 614 Pfam Leucine rich repeat 141 201 IPR001611 GO:0005515
Trre14g01852 614 Gene3D Ribonuclease Inhibitor 140 233 IPR032675 -
Trre14g01852 614 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Trre14g01852 614 FunFam Probable inactive receptor kinase RLK902 28 185 - -
Trre14g01852 614 SUPERFAMILY Protein kinase-like (PK-like) 342 606 IPR011009 -
Trre14g01852 614 Pfam Protein kinase domain 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01852 614 Gene3D Transferase(Phosphotransferase) domain 1 415 613 - -
Trre14g01852 614 PANTHER OS05G0588300 PROTEIN 12 610 - -
Trre14g01852 614 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Trre14g01852 614 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01852 614 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 414 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01852 Trre-Chr14 16988671 16990969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01852 26 612 Receptor kinase-like Gene Family AT5G58300 60.708 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre14g01852 Pkinase 7.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01852 - - gmx:100810832 922.924