Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01851 ATGATGCTACAAACACAATCCTATTTGGTTACTATACACATTTTCTTATTACTACTACTTGTGTTTCCTCAAACTAAATCTGATCTAAATTCAGAAAAGCAAGCATTACTTGATTTTGTTGCTGCATTACATCATGGTGAAAAACTCAATTGGAGTTCCAATACTTCAATATGCACTTCTTGGATAGGAGTTAAATGCAATCCTAAGTGCTCTCATGTTCACTCCGTGCGCCTTCCGGGCATTGGATTGCGCGGTTCTCTCCCCGAAAACACGCTCGGTAAGCTATATGGTTTAATCAGTCTAAGTCTTAGGTCTAATAGCTTGAGTGGAAACCTTCCAAGTGACATATTTTCAATTCCTTCTCTAAGATTCATTTATCTTCAACATAACAATTTTTCGGGTCATATTTCCGATTATTTACCACCCCATCTTATGTTTCTTGATTTGTCCTATAACTTTTTCACCGGAAAAATTCCAAGCATAATCCAAAACTTGACATATCTTATAGGACTAAACCTTCAAAATAACTCTCTCATAGGACCTATTCCAAATGTTATTGTTGAGCTTCCTAATCTTAAGAATTTGGATTTGAGCTTCAACTATTTGAATGGCTCAATCCCCTCAGGGCTTCATAAGTTTCATGCATCATCATTTAAGGGTAATCTAGGATTATGTGGTGCACCTTTGAAACAATGTTCTTTAGATTCTTCCCCTACTACTATTTTGTCTCCACTAATAGTCTCACAAAAAGTACCTAATGATATCTCAAACAAGAAACTAAGTACATGGGGAAAAATTGCTATATCTTTGGGAGTTTTTGCAGCTTTGCTTCTACCAGCTCTTGTAGTAGTGTTCTGTTGTTTCAAGAAAAAAGTAGGTGAACAAAATGTAGTAACTAAAGAGAAGAGTGAGAAGCTTATGGAAGAATTTGGAAGTGGTGTGCAAGAAAATGAGAAAAATAAGTTAATATTTTTTGAAGGGTGTTCTTATAATTTTGATCTTGATGATTTGTTAAGAGCTTCTGCTGAAGTGCTTGGTAAGGGAAGTTGTGGAACAACTTATAAAGCTATTTTGGAAGAAGGGACAATAGTGGTTGTGAAGAGATTAAAAGAAGTGGCAGTGGTTAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGGCTTAATCATCATCCAAATGTAGTTCCACCAAGTGCTTACTATTATTCAAAGGATGAAAAATTGATTGTTTATGATTATTTCACATCTGGCAGCTTTTCCAAGTTATTGCATGGAACAGGTGAAACTGCACGAACTCGACTAGATTGGGATTCAAGATTGAAGATAATGGCTGGAGCTGCTAAGGGCATTGCCCATATCCACTCAGCAAATGGAAGGAAACTTGTCCATGGCAACATAAAATCATCCAATGTGCTTCTCTCAATAGATCTTCAAGGCTGCATATCAGATTTTGGCCTAACACCTCTAACAAGTTTATGTGTCTCCCCCAGAAGTCCTCCAGGGTACCGAGCACCGGAGGTGAACGAAAGCAGAAAATTCACTCAAAAATCTGATGTATACAGCTTTGGTGTTCTTCTTCTTGAGATGCTGACAGGGAAAACACCAGTTCAGTATTCAGGTCATGAAGATGTGGTTGATCTTCCAAAATGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATGTTGAGCTAATGAGATATTCAAACATTGAAGAAGAACTTGTGCAGATGTTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACACAAGACCTTCAATGGAAGAAGTTGTTAGGATGATTGAAGACATAAGAGGATCCATTTATTAA 1848 0.3734 MMLQTQSYLVTIHIFLLLLLVFPQTKSDLNSEKQALLDFVAALHHGEKLNWSSNTSICTSWIGVKCNPKCSHVHSVRLPGIGLRGSLPENTLGKLYGLISLSLRSNSLSGNLPSDIFSIPSLRFIYLQHNNFSGHISDYLPPHLMFLDLSYNFFTGKIPSIIQNLTYLIGLNLQNNSLIGPIPNVIVELPNLKNLDLSFNYLNGSIPSGLHKFHASSFKGNLGLCGAPLKQCSLDSSPTTILSPLIVSQKVPNDISNKKLSTWGKIAISLGVFAALLLPALVVVFCCFKKKVGEQNVVTKEKSEKLMEEFGSGVQENEKNKLIFFEGCSYNFDLDDLLRASAEVLGKGSCGTTYKAILEEGTIVVVKRLKEVAVVKKEFEQQMEIVQRLNHHPNVVPPSAYYYSKDEKLIVYDYFTSGSFSKLLHGTGETARTRLDWDSRLKIMAGAAKGIAHIHSANGRKLVHGNIKSSNVLLSIDLQGCISDFGLTPLTSLCVSPRSPPGYRAPEVNESRKFTQKSDVYSFGVLLLEMLTGKTPVQYSGHEDVVDLPKWVQSVVREEWTAEVFDVELMRYSNIEEELVQMLQLAMACVAVMPDTRPSMEEVVRMIEDIRGSIY 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01851 615 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 415 613 - -
Trre14g01851 615 Pfam Leucine rich repeat 142 202 IPR001611 GO:0005515
Trre14g01851 615 Pfam Protein kinase domain 342 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01851 615 SUPERFAMILY L domain-like 49 213 - -
Trre14g01851 615 Gene3D Ribonuclease Inhibitor 141 234 IPR032675 -
Trre14g01851 615 FunFam Probable inactive receptor kinase RLK902 29 186 - -
Trre14g01851 615 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Trre14g01851 615 PANTHER OS05G0588300 PROTEIN 12 611 - -
Trre14g01851 615 ProSiteProfiles Protein kinase domain profile. 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01851 615 SUPERFAMILY Protein kinase-like (PK-like) 343 607 IPR011009 -
Trre14g01851 615 FunFam pollen receptor-like kinase 1 307 414 - -
Trre14g01851 615 Gene3D Transferase(Phosphotransferase) domain 1 416 614 - -
Trre14g01851 615 Gene3D Phosphorylase Kinase; domain 1 305 414 - -
Trre14g01851 615 Gene3D Ribonuclease Inhibitor 30 140 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01851 Trre-Chr14 16988671 16990972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01851 27 613 Receptor kinase-like Gene Family AT5G58300 60.708 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre14g01851 Pkinase 7.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01851 - - gmx:100810832 922.924