Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01837 ATGGTTTCATCTCAGTTTTCCGGTTCGACTATGGCTGGCATGTTTAAACCATTACTCTTTCCTGCAAATGATCCTGGTACTGCAACCACAGATCACGTTGAGCTAGATTTTTCTGATGTCTTCGGTCCACTTACAGTAGAAGTCAATGATGAATCGATTGATGAATCAAGCGAGCTGGTTTATGATGACCCAGAAGTCATTTACACACGCTCACATTCTCTTGTTGGCCCTTCTAGTTGTATCAGTCAATCACTTAAACTCGGTAAGCTCACCATACACGAGTCTGACTCTGCCGAATCATTGGAACTAGTGGAGCCCGTCACTGAAGAGACCATTGAAGACATCAAAGAGTCTAACACTGACAATGTTATCATCGAGGAATCTTTGAATGATGAAGATGGGAACCTCATGGAGATCCAAAGAGTTAGCATTGAAGATTTTGAGGTTTTGAAGGTTGTGGGGCAAGGAGCATTTGCAAAAGTGTATCAGGTGAGGAAAAAGGGCACTTCAGAAATATATGCTATGAAGGTTATGCGGAAGGATAAGATTATGGAGAAGAACCATGCTGAATACATGAAAGCTGAGAGGGAGATTTTGACAAAGATAGAGCACCCCTTTGTTGTACAACTTAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTCGATTTCGTTAATGGGGGTCATCTCTTCTTTCAGCTTTATCACCAGGGGCTTTTCAGAGAGGATCTAGCACGCATATACGCCGCCGAGATTGTTTCTGCAGTTTCCCATCTCCACTCAAAAGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTAATGGATGCTGATGGCCATGTTATGTTGACTGATTTTGGCTTAGCAAAACAATTTGAAGAAAGTACAAGATCTAATTCTATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCCGATTGGTGGAGTGTAGGCATCTTATTGTTTGAGATGCTTACCGGAAAGCCGCCCTTCTGTGGTGGGAACCGTGAGAAGATTCAGCAGAAGATAGTGAAAGATAAGATTAAGCTGCCAGGATATTTGTCAAGCGAAGCGCATGCACTGTTGAAAGGGCTGCTACAGAAGGAGGCATCGAAGCGTTTAGGTTGTGGAGCTAAAGGGATTGAGGAAATTAAAGGGCACAAGTGGTTCAAACCAATCAATTGGAAGAAGTTGGATGCACGCGAAATTGAACCAAGCTTTCGGCCAGACGTAGCTGGGACGCACTGTGTTGCCAACTTTGAGAAGCGTTGGACTGATATGCCTCTTGTTGATTCACCAGCTGCAAGCCCAAATGGTGGAAACCCCTTCAAGGACTTCTCTTATGTGAGACCTGCAGCTTCTTTTCTTCAAAACAATAGCCCTGCTTGCTAA 1431 0.4326 MVSSQFSGSTMAGMFKPLLFPANDPGTATTDHVELDFSDVFGPLTVEVNDESIDESSELVYDDPEVIYTRSHSLVGPSSCISQSLKLGKLTIHESDSAESLELVEPVTEETIEDIKESNTDNVIIEESLNDEDGNLMEIQRVSIEDFEVLKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAEREILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSKGIMHRDLKPENILMDADGHVMLTDFGLAKQFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIVKDKIKLPGYLSSEAHALLKGLLQKEASKRLGCGAKGIEEIKGHKWFKPINWKKLDAREIEPSFRPDVAGTHCVANFEKRWTDMPLVDSPAASPNGGNPFKDFSYVRPAASFLQNNSPAC 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01837 476 SMART serkin_6 147 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01837 476 FunFam Non-specific serine/threonine protein kinase 227 422 - -
Trre14g01837 476 SMART pkinase_C_6 404 463 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre14g01837 476 ProSiteProfiles Protein kinase domain profile. 147 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01837 476 CDD STKc_AGC 153 403 IPR045270 GO:0004674|GO:0005524
Trre14g01837 476 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Trre14g01837 476 Pfam Protein kinase domain 147 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01837 476 PANTHER RIBOSOMAL PROTEIN S6 KINASE 112 466 - -
Trre14g01837 476 FunFam Non-specific serine/threonine protein kinase 144 250 - -
Trre14g01837 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Trre14g01837 476 SUPERFAMILY Protein kinase-like (PK-like) 144 463 IPR011009 -
Trre14g01837 476 ProSiteProfiles AGC-kinase C-terminal domain profile. 404 471 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre14g01837 476 Pfam Protein kinase C terminal domain 426 461 IPR017892 GO:0004674|GO:0005524|GO:0006468
Trre14g01837 476 Gene3D Phosphorylase Kinase; domain 1 144 444 - -
Trre14g01837 476 Gene3D Transferase(Phosphotransferase) domain 1 227 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01837 Trre-Chr14 16904911 16907361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01837 1 473 AGC Kinase Gene Family AT3G08720 68.399 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Trre14g01837 Pkinase 2.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01837 K04688 - gmx:100804819 808.52