Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g01832 | ATGGAAAATATAGAAAATCTAGCTCATGGTCGTGGAAAGATAATTGATGAGTTGTTAAGAGGTCGTGATCTAGCAAATCAACTTAGACATATTCTCAATGAAAGTGTTGATATTGATCATAATAATAATGATTCAACAACACCATTTGCTGAAAATCTTTTAAAGGAAGTGCTTATGACTTTTACAAATTCACTTTTGTTCTTGAACAATAATTCTACTTCAGATGTCTCTGATGCTCAACTCACCAAATCTGAGGATTCTTTGGAGAGTAATTGCAAGAGTACTTCCATTGTTAAGGAACGAAGAGGTTGTTACAAAAGAAGAAAAATTTCACAAACATGGGAGAAGGAATCTGAACAACCAGTGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATCCTCCACATTGATTTCCCAAGGAACTACTATAGGTGCACTCACAAATATGATCAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATTCAAGAAGAACCACTTCTTCACAAAACAACCTATTATGGCCATCACACTTGTAGAGTCATACAAAACCCTGATATCATAGTGGATTCACTTTCTCCTACTCATCACTCTTCCATGTTTCTTAGCTTTGACAACACTTTCCCAACACCAACTAAACAAGATTGCCCTTTTCTCTCAACTTCTTCTCATCCATCATCAACATCATCATCAGTGAAAAGAGAGAAGTGCAAGGAAGAGATTGTTAATCATCCTCCTCCTCCCCCACTTCCTTCATCTTCCCACAATGATTACCTCTCTGGACTCACTTTTGATGATTCAGAAAAACATGTCACACTATCATCAACACTTGATTCTCATGATCACTTAGGTGTCAATATTTCTGATATCTTGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA | 915 | 0.3639 | MENIENLAHGRGKIIDELLRGRDLANQLRHILNESVDIDHNNNDSTTPFAENLLKEVLMTFTNSLLFLNNNSTSDVSDAQLTKSEDSLESNCKSTSIVKERRGCYKRRKISQTWEKESEQPVEDGHQWRKYGQKKILHIDFPRNYYRCTHKYDQGCKATKQVQKIQEEPLLHKTTYYGHHTCRVIQNPDIIVDSLSPTHHSSMFLSFDNTFPTPTKQDCPFLSTSSHPSSTSSSVKREKCKEEIVNHPPPPPLPSSSHNDYLSGLTFDDSEKHVTLSSTLDSHDHLGVNISDILYDDVLNWPLS | 304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g01832 | 304 | Pfam | WRKY DNA -binding domain | 123 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre14g01832 | 304 | SMART | WRKY_cls | 122 | 184 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre14g01832 | 304 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 18 | 226 | IPR044810 | GO:0003700 | |
Trre14g01832 | 304 | SUPERFAMILY | WRKY DNA-binding domain | 120 | 183 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre14g01832 | 304 | ProSiteProfiles | WRKY domain profile. | 117 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre14g01832 | 304 | Gene3D | WRKY domain | 91 | 184 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre14g01832 | 304 | MobiDBLite | consensus disorder prediction | 220 | 264 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g01832 | Trre-Chr14 | 16849607 | 16851555 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g01832 | 13 | 205 | WRKY Transcription Factor Family | AT3G56400 | 39.130 | 1.59e-37 | 133 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Trre14g01832 | WRKY | 2.3e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g01832 | - | - | aprc:113861812 | 330.872 |