Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01832 ATGGAAAATATAGAAAATCTAGCTCATGGTCGTGGAAAGATAATTGATGAGTTGTTAAGAGGTCGTGATCTAGCAAATCAACTTAGACATATTCTCAATGAAAGTGTTGATATTGATCATAATAATAATGATTCAACAACACCATTTGCTGAAAATCTTTTAAAGGAAGTGCTTATGACTTTTACAAATTCACTTTTGTTCTTGAACAATAATTCTACTTCAGATGTCTCTGATGCTCAACTCACCAAATCTGAGGATTCTTTGGAGAGTAATTGCAAGAGTACTTCCATTGTTAAGGAACGAAGAGGTTGTTACAAAAGAAGAAAAATTTCACAAACATGGGAGAAGGAATCTGAACAACCAGTGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATCCTCCACATTGATTTCCCAAGGAACTACTATAGGTGCACTCACAAATATGATCAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATTCAAGAAGAACCACTTCTTCACAAAACAACCTATTATGGCCATCACACTTGTAGAGTCATACAAAACCCTGATATCATAGTGGATTCACTTTCTCCTACTCATCACTCTTCCATGTTTCTTAGCTTTGACAACACTTTCCCAACACCAACTAAACAAGATTGCCCTTTTCTCTCAACTTCTTCTCATCCATCATCAACATCATCATCAGTGAAAAGAGAGAAGTGCAAGGAAGAGATTGTTAATCATCCTCCTCCTCCCCCACTTCCTTCATCTTCCCACAATGATTACCTCTCTGGACTCACTTTTGATGATTCAGAAAAACATGTCACACTATCATCAACACTTGATTCTCATGATCACTTAGGTGTCAATATTTCTGATATCTTGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA 915 0.3639 MENIENLAHGRGKIIDELLRGRDLANQLRHILNESVDIDHNNNDSTTPFAENLLKEVLMTFTNSLLFLNNNSTSDVSDAQLTKSEDSLESNCKSTSIVKERRGCYKRRKISQTWEKESEQPVEDGHQWRKYGQKKILHIDFPRNYYRCTHKYDQGCKATKQVQKIQEEPLLHKTTYYGHHTCRVIQNPDIIVDSLSPTHHSSMFLSFDNTFPTPTKQDCPFLSTSSHPSSTSSSVKREKCKEEIVNHPPPPPLPSSSHNDYLSGLTFDDSEKHVTLSSTLDSHDHLGVNISDILYDDVLNWPLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01832 304 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01832 304 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01832 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 226 IPR044810 GO:0003700
Trre14g01832 304 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01832 304 ProSiteProfiles WRKY domain profile. 117 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01832 304 Gene3D WRKY domain 91 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01832 304 MobiDBLite consensus disorder prediction 220 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01832 Trre-Chr14 16849607 16851555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01832 13 205 WRKY Transcription Factor Family AT3G56400 39.130 1.59e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g01832 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01832 - - aprc:113861812 330.872