Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01826 ATGTTGAAATTCAGCAGAACATGTTTGTTTTTGAGTCTTTTTAGTTTGGTTATGGTTTCAGTGTTTTGTGTTGATGATCCTGTTTTCAATGATGAAATAATGGGATTAATTGTGTTTAAAGCTGGTTTACAAGATCCTAATCATAAACTTTCTTCATGGAATGAAGATGATTACACACCTTGTAATTGGGAAGGTGTGAAATGTGATTCTTCAAACAATAGAGTTATTTCTATTGTTCTTGATGGTTTTTCTCTTTCAGGACACATTGATAGAGGCTTATTGAGATTACAGTTTCTTCAAACTCTTTCACTTTCTGGTAATAATTTTACTGGTTTCATAAACCCTGATCTTCCTAAACTTGGAAATTTACAAGTTGTTGATTTTAGTCATAATAATCTTAAAGGGTCAATTCCTGAAGAGTTTTTTCAACAATGTGGATCTTTGAAAACTGTTAACTTTGCTAAGAATAATCTTACAGGTAAAATTCCTGATTCTCTTAGCTCATGTAACACTTTGATAAATGTTAACTTTTCTTATAATCAAATTTATGGAAATTTGCCATCTGAGGTGTGGTTTTTGAGAGGATTACAATCACTTGATGTTTCGAGTAACTTGCTCGAAGGAGAAATTCCTAAAGGGATTCAAAACCTTTATGATTTGAGGGAGTTGAGTTTGAAGAAAAACCGATTTAGTGGTAGAATTCCCGAGGATATCGGTGGTTGCGTAGTTTTGAAATCACTTGATTTGAGTGGTAATTTTCTATCTGGTGGAATTCCTCAATCAATGCAAAGATTGAATTCTTGTAATTCTCTTAGTTTGCAAGGAAATTCATTCACCGGTAATGTTCCTGATTGGATTGGTGAGTTGAAAGATCTAGAAATATTGGATCTTTCTGAAAATAGATTTTCTGGTTGGATTCCAAAGTCATTAGGAAATCTTGAAATGCTGCAAAGATTGAATTTTTCGAGGAATCAGTTAACAGGAAACTTGCCGGATTCAATGATGAACTGTACTAAGCTTTTGGCTCTTGACATCAGTCAAAATCATTTGGATGGTTATCTTCCTTCATGGATTTTTAGGAAGGGTAATTATCATGGTCTCGAGGTTTTGGATTTGTCTTCCAATGGATTTTCTGGCGAACTTCCATCTGATATCGGTGGTCTTGTTAGTTTGAAAATCTTGAATTTGTCTACCAACTATTTCTCCGGTTCTATTCCTATTGGTATAGGTGAACTCAAATCTTTATACATTGTTGACTTGAGTGAGAACTCACTTAATGGAAGCATTCCTTTTGAAATAGAAGGTGCAATTTCACTCGGTGAGTTGAGGCTACACAAGAATTCACTTGGTGGGAGAATTCCCGAACAAATCGCAAAGTGTTCATCTCTAACAACTTTGATTCTTTCACACAACAAGCTTACTGGTTCAATCCCTGCGGCCATTGCAAACCTAACCAATCTTCAGCATGTAGATTTGTCGTGGAATGAGCTCTCTGGTAGTCTACCAAAGGAGCTGACAAATCTTTCCAATCTTTTATCATTCAATGTGTCGTACAACCACCTTCAAGGTGAGTTACCGGTTGGTGGATTCTTCAACACCATATCCTCTACATCTGTTACCGGTAACTCATTGTTGTGTGGTTCTGTTGTCAACCACTCCTGTCCATCGGTTCATCCGAAACCTATTGTCTTGAATCCCAACTCTTCCGCTCCCAACTCCAGCGTTTCCTCGAAATATCATCGACACAAGATCATTCTTAGTATATCTGCTCTTATTGCTATTGGTGCAGCTGCTTTTATTGCAGTTGGCGTTGTGGCTATCACTTTCCTAAATATGCGCGCCCGTTCTGCAATGGAACGTTCTCCTGCTCCATTTGCATTTTCCGGTGGTGACGACTATACAAATTCTCCGGAGAATGATCCAAACTATGGCAAACTTGTGATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCTCATAATCTCCTTAATAAAGAGAGTGAAATAGGCCGTGGTGGATTTGGAGTTGTTTATCGCACTTTCCTTCGAGACGGACATGCTGTTGCAATCAAGAAACTGACAGTCTCAAGTTTGATCAAGTCTCAAGAAGAGTTCGAAAAGGAAGTGAAAAGGTTTGGAAAAATTCGGCACCAGAATCTTGTGGCACTCGAAGGTTATTATTGGACATCATCGTTGCAGCTTCTCATTTACGAGTACCTATCAAGTGGTAGCTTGCATAAGCTTCTGCACGACAATAGCAACAAAAATGTCTTATCTTGGCGACAAAGGTTCAACATTATTCTCGGCATGGCAAAAGGGTTGGCACATTTGCACGAAACAAACATAATCCACTATAATCTTAAATCAACCAATGTCTTAATTGACTGTTCCGGCGAGCCAAAGATCGGTGATTTCGGCCTGGTGAAGCTCTTACCGATGCTAGACCATTGCGTATTAAGCAGCAAAATTCAAAGTGCACTCGGATACATGGCTCCCGAGTTTGCTTGTCGAACAGTTAAGATAACCGAGAAATGCGACGTGTACGGTTTCGGGATCCTTATTTTGGAGATAGTGACAGGAAAAAGACCTGTGGAATACATGGAAGATGATGTGGTGGTTCTATGTGACATGGTGAGGGGTGCATTGGAAGAAGGAAAAGTTGAACAATGTATTGATGAAAGGCTTTTAGGTAATTTTGCTGCTGAAGAAGCAATTCCTGTGATAAAACTGGGATTGATTTGTGCATCACAAGTTCCATCAAATAGGCCTGATATGAGTGAGGTTATCAACATTTTAGAGTTAATTCAGTGCCCTTCAGAAGGACAAGAGGAACTATTAGAATGA 2844 0.3847 MLKFSRTCLFLSLFSLVMVSVFCVDDPVFNDEIMGLIVFKAGLQDPNHKLSSWNEDDYTPCNWEGVKCDSSNNRVISIVLDGFSLSGHIDRGLLRLQFLQTLSLSGNNFTGFINPDLPKLGNLQVVDFSHNNLKGSIPEEFFQQCGSLKTVNFAKNNLTGKIPDSLSSCNTLINVNFSYNQIYGNLPSEVWFLRGLQSLDVSSNLLEGEIPKGIQNLYDLRELSLKKNRFSGRIPEDIGGCVVLKSLDLSGNFLSGGIPQSMQRLNSCNSLSLQGNSFTGNVPDWIGELKDLEILDLSENRFSGWIPKSLGNLEMLQRLNFSRNQLTGNLPDSMMNCTKLLALDISQNHLDGYLPSWIFRKGNYHGLEVLDLSSNGFSGELPSDIGGLVSLKILNLSTNYFSGSIPIGIGELKSLYIVDLSENSLNGSIPFEIEGAISLGELRLHKNSLGGRIPEQIAKCSSLTTLILSHNKLTGSIPAAIANLTNLQHVDLSWNELSGSLPKELTNLSNLLSFNVSYNHLQGELPVGGFFNTISSTSVTGNSLLCGSVVNHSCPSVHPKPIVLNPNSSAPNSSVSSKYHRHKIILSISALIAIGAAAFIAVGVVAITFLNMRARSAMERSPAPFAFSGGDDYTNSPENDPNYGKLVMFSGDADFADGAHNLLNKESEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEEFEKEVKRFGKIRHQNLVALEGYYWTSSLQLLIYEYLSSGSLHKLLHDNSNKNVLSWRQRFNIILGMAKGLAHLHETNIIHYNLKSTNVLIDCSGEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCIDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMSEVINILELIQCPSEGQEELLE 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01826 947 Gene3D Phosphorylase Kinase; domain 1 648 739 - -
Trre14g01826 947 SUPERFAMILY L domain-like 46 358 - -
Trre14g01826 947 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Trre14g01826 947 Pfam Protein tyrosine and serine/threonine kinase 664 872 IPR001245 GO:0004672|GO:0006468
Trre14g01826 947 Gene3D Ribonuclease Inhibitor 311 560 IPR032675 -
Trre14g01826 947 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 657 739 - -
Trre14g01826 947 SUPERFAMILY L domain-like 284 547 - -
Trre14g01826 947 SMART LRR_typ_2 484 507 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 289 312 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 388 412 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 508 532 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 120 144 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 313 337 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 193 216 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 217 241 IPR003591 -
Trre14g01826 947 SMART LRR_typ_2 460 483 IPR003591 -
Trre14g01826 947 FunFam Inactive leucine-rich repeat receptor-like protein kinase 188 284 - -
Trre14g01826 947 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Trre14g01826 947 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 740 941 - -
Trre14g01826 947 Pfam Leucine rich repeat 292 350 IPR001611 GO:0005515
Trre14g01826 947 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Trre14g01826 947 Pfam Leucine rich repeat 194 252 IPR001611 GO:0005515
Trre14g01826 947 FunFam LRR receptor-like serine/threonine-protein kinase 287 360 - -
Trre14g01826 947 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 309 430 IPR046959 -
Trre14g01826 947 Gene3D Ribonuclease Inhibitor 193 310 IPR032675 -
Trre14g01826 947 ProSiteProfiles Protein kinase domain profile. 663 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01826 947 CDD STKc_IRAK 669 935 - -
Trre14g01826 947 FunFam Leucine-rich repeat receptor-like protein kinase 29 187 - -
Trre14g01826 947 ProSitePatterns Protein kinases ATP-binding region signature. 669 692 IPR017441 GO:0005524
Trre14g01826 947 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 361 557 - -
Trre14g01826 947 Gene3D Transferase(Phosphotransferase) domain 1 740 944 - -
Trre14g01826 947 SUPERFAMILY Protein kinase-like (PK-like) 664 936 IPR011009 -
Trre14g01826 947 Pfam Leucine Rich Repeat 99 120 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01826 Trre-Chr14 16769947 16773225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01826 11 943 Receptor kinase-like Gene Family AT5G01890 60.436 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Trre14g01826 PK_Tyr_Ser-Thr 8.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01826 - - mtr:11433630 1687.55