Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01818 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAGAAGTCTGATTCGTTTGCTTATGTAAAACGCATAAACCATAACGATCATGCGCCTTCAGTACTTCCTGAACCTCAAACTCATACTCGTTCACTACAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCAATCAACCTGTTAATAAAGTCACTAACAATAGAACACGGGCATTATCCGCTCCTTCAACTCTTGATGCAGCAGATCAAGATGCTTTAACCTCGATTGAGTATGAGGAACAAGAAGAGTCAAAATACCGAGGAGGAGGATCAATGAAGGAGCAGCGTTCTTCTAGTCCGCAACCTTTACCACTACCATCTCCTCAGGGATGTAGTTCACTGAAGACTATTGGCAGCTTTAAGTTGGGGACTGCTAGTGTTCCTCTACATGCTTCTGGACCTTTGCCGCTTCCACCAACTGGTTCACTTCGGAACTTTCCGTATGAAGAAGTTGCTGCTGCTTGCCACAATTTCTCTTCTGATCGATGCATGTCAGAATGTCTTTCGTCTACAATATACAAAGCTTACTTTGGTGATGATCCTTCAAGTGCAAAGAAGTTTGAAGCCACTGTTACACGCCTTCACCCATCATCTCAGGGTTTGAAGGATTTCATAAATGAGGTCAATACTCTCGCAACTTTGCAACATCCAAACCTTTGTAAACTGCTAGGATTTCATGCTCGTGATGGTTCAGAACATAGAATGTTGGTCTATGAGAGGCTATACCATGGAAGCTTGGATCGCCTGTTGTATGGTAGATCTGATGGACCATCCATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCACAGGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCGACAGCCAACATACAGATTGACAAAGATTTCAGTGCCAAGCTTTCTGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCCAGTAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTGACACCAAAGAGCAATGTATGGAGCTTTGGAATTTTTCTTTTGGAGTTACTTACCGGAAGAAAGAATCTCGATAGTCGTCACCCTAAGGAAGAGAGGAATTTAGTCAAATGGAGTAGGCCTTTCCTAGCTGATGATTACCGTTTATCGTTGATCATGGACCCTCAACTTAAAGGTCGATTTCCTTCCAAAGCAGCAAGAACAATAGCCGACATTGCACAAAGATGCCTACAAAAGGAACCATCGGATAGACCCACCATGAGAATTGTTGTTGAGCATCTCAAAACAATACAGGATTTGAAACACTCTTGCAGGTTCCCACTTCAAGAACCAGCGCCATTATCCGGAAAAGAAATGTCAAGATCACCAAGTCTTAATGGTATCGTCTGCCCTGCGCCAAGGTTGAGTTTTTCTCCATCACGGCCATCCGTAGCCCCGCTATCTGTTTCGCCTCCAAGATGGTCCAGTGTGCCCGTCCTTCCACCTCGAGCTTGTTCTTCTATGGAAGAACTCGATAGGCAAGAAAGCCGTAAATCATCCTCAGCCTCTAGGAGGGCTAGTGTTGAAGGATTTTGA 1629 0.4383 MGCFTVLKSKKKKSDSFAYVKRINHNDHAPSVLPEPQTHTRSLQSAPPSFRTRVKPNQPVNKVTNNRTRALSAPSTLDAADQDALTSIEYEEQEESKYRGGGSMKEQRSSSPQPLPLPSPQGCSSLKTIGSFKLGTASVPLHASGPLPLPPTGSLRNFPYEEVAAACHNFSSDRCMSECLSSTIYKAYFGDDPSSAKKFEATVTRLHPSSQGLKDFINEVNTLATLQHPNLCKLLGFHARDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRIVVEHLKTIQDLKHSCRFPLQEPAPLSGKEMSRSPSLNGIVCPAPRLSFSPSRPSVAPLSVSPPRWSSVPVLPPRACSSMEELDRQESRKSSSASRRASVEGF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01818 542 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Trre14g01818 542 MobiDBLite consensus disorder prediction 31 82 - -
Trre14g01818 542 PANTHER OS01G0588500 PROTEIN-RELATED 97 449 - -
Trre14g01818 542 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Trre14g01818 542 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01818 542 MobiDBLite consensus disorder prediction 519 533 - -
Trre14g01818 542 Gene3D Transferase(Phosphotransferase) domain 1 253 458 - -
Trre14g01818 542 SUPERFAMILY Protein kinase-like (PK-like) 149 457 IPR011009 -
Trre14g01818 542 MobiDBLite consensus disorder prediction 492 542 - -
Trre14g01818 542 MobiDBLite consensus disorder prediction 25 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01818 Trre-Chr14 16726314 16728609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01818 149 449 Receptor kinase-like Gene Family AT4G02010 38.111 1.48e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Trre14g01818 PK_Tyr_Ser-Thr 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01818 - - gmx:100809117 915.22