Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01798 ATGGGAAATTACAGGTTCAAATTGTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACAACAACAAAGGAAGAAAAAGAAATCTTCAAGTTCAACAACCTCAAACACATCAAAATCAAAGCAACCCTACCAAACAAATCCAAGAAAATCTTACTATTTTACAAGAGAACTTAACCAAACAAACAACAAAGATTTTTCACATGAACTACCTAGAAAATCTTCATCAAAACAACAAAGACCAAAAAGAAAAACACCAAAATCTTCATCTTCAACATCATCTCCACTTTATAGTTCTGCAGAATCAGAGTCCCCTGATCCAGAAATCAGAACTGACCGTGTTCTTCTTCCAACAAATGACATCATAATAGATGTTGATAACAATTCTCTCATTGCAACAAGAAAAGATGATAAGCTAAATGGGTATGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTAACAAAACCAGAAAACTTCAATTACTTGCTCAACTATGCAAAGAAGAAACAAACAAAACCCAGAAACAAAATCTCATCAAATGATGAACATAACGTTAAAGGGTCACTAAAAGTTAAGATTTTGAAGGAAGAACAGAGGAACATCAACACAAACACACCAAGTAGAAGATTCTCTATGAGTTCACCAGGTGTGAAACTTAGAATCAATTCACCAAGACTTTCAAGCAAGAAAATTCAATCAAATGGCCGGAAAAGCGTGTCGTCGACCACCACTAGTTCAGCCGGTAACCGGAGAAGTCTTTCGGATAGTTTCGCAATTGTGAAGTCATCAATGAATCCACAGAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAGAATAACATTAGAACATCAAAGGATTTAGAAGATCTTCTTGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATGAAGTTATCATCAAAGTTTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1008 0.3482 MGNYRFKLSDMMPNAWFYKLRDMGRTRNQTQQQRKKKKSSSSTTSNTSKSKQPYQTNPRKSYYFTRELNQTNNKDFSHELPRKSSSKQQRPKRKTPKSSSSTSSPLYSSAESESPDPEIRTDRVLLPTNDIIIDVDNNSLIATRKDDKLNGYDSLSELMKLPPIVTKPENFNYLLNYAKKKQTKPRNKISSNDEHNVKGSLKVKILKEEQRNINTNTPSRRFSMSSPGVKLRINSPRLSSKKIQSNGRKSVSSTTTSSAGNRRSLSDSFAIVKSSMNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHEVIIKVFKQIWFDLTDNQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01798 335 MobiDBLite consensus disorder prediction 95 111 - -
Trre14g01798 335 MobiDBLite consensus disorder prediction 23 119 - -
Trre14g01798 335 MobiDBLite consensus disorder prediction 214 262 - -
Trre14g01798 335 MobiDBLite consensus disorder prediction 35 71 - -
Trre14g01798 335 ProSiteProfiles OVATE domain profile. 271 330 IPR006458 -
Trre14g01798 335 Pfam DNA-binding domain 1 49 IPR025830 GO:0003677
Trre14g01798 335 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 333 IPR038933 GO:0045892
Trre14g01798 335 NCBIfam uncharacterized plant-specific domain TIGR01568 270 332 IPR006458 -
Trre14g01798 335 Pfam Transcriptional repressor, ovate 275 331 IPR006458 -
Trre14g01798 335 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01798 Trre-Chr14 16493655 16494662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre14g01798 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01798 - - aprc:113863721 379.407