Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01797 ATGGCGGAAGAATCACCAATTCAAACACAAAACGAGTCAAAACGCGTCGTTTTGTTCGGTAAATATGAAGTTGGAAGATTATTGGGCGTTGGTGCATCTGCGAAGGTGTACCACGCGACGAACGTTGAAAACGGGAAGAGCGTGGCGGTGAAAGTCATAAGCAAGAAAAAACTCAGCAATGGAAGCTTCGCCGCGAACATTGAACGCGAGATCTCAATTCTCCGCCGTCTCCACCACCCTAACATCATCGACCTGTTCGAAGTCCTTGCATCTAAGAACAAAATTTACTTCATCGTTGAATTCGCCGCCGCCGGCGAACTCTTCGAAGAAGTAGCCGGTAAAGAAAAGCTCACTGAAGACCATGCTAGAAGATACTTCCGGCAACTCATCTCCGCCGTGAAACACTGTCACTCTCGCGGCGTTTTCCATCGCGATCTTAAACTCGATAATCTCTTACTTGACGAGAATGATAATCTCAAAGTAACGGATTTCGGTTTAAGCGCCGTTAAAAACCAGATCCGACCTGACGGTTTACTTCACACCGTTTGTGGTACACCATCCTACGTGGCACCGGAGATTCTCGCGAAGAAAGGCTATGACGGTGCAAAAGCAGATATATGGTCATGCGGCGTCGTTTTATTTGCTCTTACTACAGGATATTTACCGTTCAATGATTATAATGTTACCGTGCTTTATAGAAAAATTTACCGCGGTCAATTTCGTTTACCGAAATGGATATCTTGTGATCTGAAGAATCTCTTATCACGTTTATTGGATACCAATCCTAAAACAAGGATAACCGTTGATGAGATTCTTGAAGACCCGTGGTTCAACTCGGGTGGGTTTAAGTTGGACCGGGTTTTAGTCAAGTGTGAGGTGGAGGAGGAGAATCGAACCGGGTTTAAACCAATGAACGCGTTTGATTTGATATCTTTTTCAACCGGGTTGGATATGTCGGGTATGTTCGAGGAAAATGACAGGTCGGGTTTAGCTGAACGGGTCGTTTCGGCGGAGGTGCCAGGGAGGATTTTGGAGAGAGTGGCGGAGGTGGTGAAGGGGACAAAAGTGGTGGTCAAAGGGATGGAGAATTGTGGTGGAGCAAAGTTGGAAGGGCAAGAAGGTAATTTGATCGCTCTTGTTGTGTTTTACCGGTTAACGGATGAGTTGGTTGTAGTTGAAATGAAGAAGCGTGGAAAAGGGGAAGAATATAGCGCGCAATTGTGGAAAAATAAATTGAAACCTTTGCTTGTTGAGTTGGCTCAGAAACAGGAATTACCGGTTTCTCGGTGA 1290 0.455 MAEESPIQTQNESKRVVLFGKYEVGRLLGVGASAKVYHATNVENGKSVAVKVISKKKLSNGSFAANIEREISILRRLHHPNIIDLFEVLASKNKIYFIVEFAAAGELFEEVAGKEKLTEDHARRYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENDNLKVTDFGLSAVKNQIRPDGLLHTVCGTPSYVAPEILAKKGYDGAKADIWSCGVVLFALTTGYLPFNDYNVTVLYRKIYRGQFRLPKWISCDLKNLLSRLLDTNPKTRITVDEILEDPWFNSGGFKLDRVLVKCEVEEENRTGFKPMNAFDLISFSTGLDMSGMFEENDRSGLAERVVSAEVPGRILERVAEVVKGTKVVVKGMENCGGAKLEGQEGNLIALVVFYRLTDELVVVEMKKRGKGEEYSAQLWKNKLKPLLVELAQKQELPVSR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01797 429 FunFam Aurora kinase A 14 105 - -
Trre14g01797 429 Gene3D Transferase(Phosphotransferase) domain 1 13 303 - -
Trre14g01797 429 Gene3D Kinase associated domain 1, KA1 304 421 - -
Trre14g01797 429 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01797 429 CDD CIPK_C 305 416 - -
Trre14g01797 429 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Trre14g01797 429 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01797 429 FunFam Non-specific serine/threonine protein kinase 102 283 - -
Trre14g01797 429 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Trre14g01797 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Trre14g01797 429 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 404 - -
Trre14g01797 429 Pfam NAF domain 303 359 IPR004041 GO:0007165
Trre14g01797 429 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01797 429 SUPERFAMILY Protein kinase-like (PK-like) 18 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01797 Trre-Chr14 16445934 16447223 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01797 17 422 CBL-interacting serine-threonine protein kinases AT2G30360 53.883 1.47e-157 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre14g01797 Pkinase 4.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01797 - K12761 gmx:100788245 576.63