Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01792 ATGGAACAAAAGGGAAGTGTGTTAATGAAAAAATATGAGCTGGGGAGATTATTAGGCCAAGGAACGTTTGCGAAGGTTTACCATGCTAGGAACCTTGTAACTGGCGTGAATGTGGCCATCAAGGTAGTTGATAAAGAAAAGGTTTTGAAAGTCGGGATGGTGGATCAGATTAAGCGTGAAATTTCAGTGATGAGATTAGTAAGACACCCAAATGTGGTCGAGCTTTATGAGGTAATGGCGACTAAAACCAAAATTTTCATTGTCATGGAGTATGCAAAAGGTGGCGAGCTCTTCAACAAGATAGCTAAAGGAAAGCTCAAGGTCGACGTTGCTAGGAGATATTTTCAGCAGCTGATTAGTGCAGTCGACTTCTGCCACAGCAGGGGTGTGTATCATCGAGATTTGAAACCTGAAAATCTACTATTGGATGAAAATGATAATTTGAAGGTTTCGGATTTTGGTTTGAGTACCCTTTCTGAATCTAAGTGCCGGGATGGATTGCTTCACACTACATGTGGTACGCCTGCGTATGTTGCTCCTGAAGTGATAAACCGAAAAGGCTATGAGGGATGCAAAGCTGATATTTGGTCGTGTGGCGTAATCTTGTTTGTTCTATTGGCTGGTTATCTTCCATTCCATGATCAAAATCTGATGGAGATGTACAGGAAAATCGGTAAAGGGGAAGTCAAATTTCCTAAATGGTTTGCACTAGAGGTTCGCCGGTTGTTGTCCAGAATATTGGATCCAAATCTAAAGACTCGGATATCAATGGCCAAAATCATGGAAAATTCGTGGTTTAAAAAGGGGTTAGAGAAGCCGATTGTTATCGATATTGGAAAAAATGAACTAGCTTCTCTGCACACTGATGGAGTGTTCGAAGTGTCCAAGAACAGCAGTGATTCTAATACGGAGTCAATACAACAACAGACCAAACCCTGCAACAACTTAAATGCCTTTGATATCATCTCCTTCTCATCTGGTTTTGATTTATCGAGCTTGTTCGAAGACACAATTCAAAAGAAAGAGATGCGGTTTACATCTAACAAGCCGGCTTCAATTATAATCTCTAAGTTCGAAGAAATTTGCAAGTGTCTTCGCTTGAAAATTACGAAAAAAGATGGAGGTTTGTTGAAGCTGGAAAGTTCAAAGGAAGGAAGGAAAGGGACTCTGAATATTGATGCCGAAATTTTCGAGATTACACCTCTCTTCCATCTCGTGGAACTTAAGAAGTCCGATGGCGATACAGTGGAGTATCAGAAGCTTTTGCAACAGGAGATTAGACCAGCACTTAAGGACATTGTGTGGAATTGGCAAGGAGAACAACCTCATGAACTCCAACATGAAGCAATGCTGGAGGAGCAACAACCATCTCTTACTGATCAAATTTGA 1389 0.4096 MEQKGSVLMKKYELGRLLGQGTFAKVYHARNLVTGVNVAIKVVDKEKVLKVGMVDQIKREISVMRLVRHPNVVELYEVMATKTKIFIVMEYAKGGELFNKIAKGKLKVDVARRYFQQLISAVDFCHSRGVYHRDLKPENLLLDENDNLKVSDFGLSTLSESKCRDGLLHTTCGTPAYVAPEVINRKGYEGCKADIWSCGVILFVLLAGYLPFHDQNLMEMYRKIGKGEVKFPKWFALEVRRLLSRILDPNLKTRISMAKIMENSWFKKGLEKPIVIDIGKNELASLHTDGVFEVSKNSSDSNTESIQQQTKPCNNLNAFDIISFSSGFDLSSLFEDTIQKKEMRFTSNKPASIIISKFEEICKCLRLKITKKDGGLLKLESSKEGRKGTLNIDAEIFEITPLFHLVELKKSDGDTVEYQKLLQQEIRPALKDIVWNWQGEQPHELQHEAMLEEQQPSLTDQI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01792 462 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 432 - -
Trre14g01792 462 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01792 462 CDD STKc_SnRK3 11 265 - -
Trre14g01792 462 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01792 462 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Trre14g01792 462 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Trre14g01792 462 FunFam Non-specific serine/threonine protein kinase 311 435 - -
Trre14g01792 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Trre14g01792 462 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Trre14g01792 462 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Trre14g01792 462 Gene3D Kinase associated domain 1, KA1 311 436 - -
Trre14g01792 462 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Trre14g01792 462 CDD CIPK_C 317 431 - -
Trre14g01792 462 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01792 462 Pfam NAF domain 314 371 IPR004041 GO:0007165
Trre14g01792 462 FunFam Non-specific serine/threonine protein kinase 2 311 - -
Trre14g01792 462 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01792 Trre-Chr14 16394072 16395460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01792 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 65.487 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre14g01792 Pkinase 7.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01792 K07198 - gmx:100803787 699.508