Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01780 ATGGCACGTCCAAATAATAATTCACTCAGAGGCTTTGATGTAATCGACAAAATAAAATCCAAAGTAGAGAGGTTATGCCCCAATACTGTCTCTTGTGCTGATATTCTTGCTGTGGCAGCAAGAGACTCAGTAGTTGCCCTTGGTGGACCTAGTTGGACTGTTCCATTGGGCCGAAGAGATTCAACCACAGCTAGTTTAAGTTTAGCTAACTCAGACATTCCAGGTGGCGGTTCTGATTTAAGTGTCCTAGTTAATACTTTCTCAAACAAAGGTTTTACAGTTAGTGAAATGGTTGCTCTTTCAGGATCACACACAATTGGTCAAGCCAGCTGTAGAACCTTCAGAAACAGGATTTACAACGAGACCAACATAGATTCATCTTTTGCAACATCATTGCAAGCAAATTGTCCAACAGCAGGTGGTAATTTAAATTTGTCACCACTTGACACCACCACTCCAAACAAATTTGACAATGCTTATTACAAGAACTTGCAAAATCTAAAGGGTCTCTTACATTCTGATCAAGTGCTTATCGATGGATCCACAATAGAACAAATTAATTCTTATGTTTCAAGAAATTCAAGATTTGAAAATGATTTTGCCGATGCAATGGTCAAAATGGCTAACCTTAGCCCACTTACTGGGTCTAGTGGTGAAATTAGAAAAATCTGTGGGAGAGTCAACTAA 687 0.3901 MARPNNNSLRGFDVIDKIKSKVERLCPNTVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLSLANSDIPGGGSDLSVLVNTFSNKGFTVSEMVALSGSHTIGQASCRTFRNRIYNETNIDSSFATSLQANCPTAGGNLNLSPLDTTTPNKFDNAYYKNLQNLKGLLHSDQVLIDGSTIEQINSYVSRNSRFENDFADAMVKMANLSPLTGSSGEIRKICGRVN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01780 228 PANTHER PEROXIDASE 72-RELATED 2 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 Pfam Peroxidase 3 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 Gene3D - 2 224 - -
Trre14g01780 228 SUPERFAMILY Heme-dependent peroxidases 2 228 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 ProSitePatterns Peroxidases proximal heme-ligand signature. 96 106 IPR019793 -
Trre14g01780 228 FunFam Peroxidase 74 207 - -
Trre14g01780 228 ProSiteProfiles Plant heme peroxidase family profile. 1 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 Gene3D Peroxidase, domain 2 74 207 - -
Trre14g01780 228 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 95 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 10 23 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 29 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 202 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 48 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Plant peroxidase signature 163 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 CDD secretory_peroxidase 6 227 IPR033905 GO:0004601|GO:0042744
Trre14g01780 228 PRINTS Haem peroxidase superfamily signature 30 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Haem peroxidase superfamily signature 48 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Haem peroxidase superfamily signature 96 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01780 228 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01780 Trre-Chr14 16259647 16261478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01780 2 228 Peroxidase AT5G05340 60.435 5.31e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01780 K00430 - gmx:100815142 327.02