Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01779 ATGATCCTTCCAATCACCAAAGTTCATTTTTTCTTACTCTTTTGCTTTATTGGCACAATTTCAGCTCAATTAGACCCTGATTTTTATGACAAAACATGTCATCATCTTTTGCTTCTCACCATTAAAACAGAAGTAAAACTTGCTGTGCACGATGAGGATCGCATGGGGGCCTCTCTACTCCGTCTTCATTTTCATGATTGTTTTGTTCAAGGATGTGATGCATCAGTACTATTGGACGATACAACAAATTTTATAGGTGAAAAAATGGCACGTCCAAATAATAATTCACTCAGAGGCTTTGATGTAATCGACAAAATAAAATCCAAAGTAGAGAGGTTATGCCCCAATACTGTCTCTTGTGCTGATATTCTTGCTGTGGCAGCAAGAGACTCAGTAGTTGCCCTTGGTGGACCTAGTTGGACTGTTCCATTGGGCCGAAGAGATTCAACCACAGCTAGTTTAAGTTTAGCTAACTCAGACATTCCAGGTGGCGGTTCTGATTTAAGTGTCCTAGTTAATACTTTCTCAAACAAAGGTTTTACAGTTAGTGAAATGGTTGCTCTTTCAGGATCACACACAATTGGTCAAGCCAGCTGTAGAACCTTCAGAAACAGGATTTACAACGAGACCAACATAGATTCATCTTTTGCAACATCATTGCAAGCAAATTGTCCAACAGCAGGTGGTAATTTAAATTTGTCACCACTTGACACCACCACTCCAAACAAATTTGACAATGCTTATTACAAGAACTTGCAAAATCTAAAGGGTCTCTTACATTCTGATCAAGTGCTTATCGATGGATCCACAATAGAACAAATTAATTCTTATGTTTCAAGAAATTCAAGATTTGAAAATGATTTTGCCGATGCAATGGTCAAAATGGCTAACCTTAGCCCACTTACTGGGTCTAGTGGTGAAATTAGAAAAATCTGTGGGAGAGTCAACTAA 951 0.3828 MILPITKVHFFLLFCFIGTISAQLDPDFYDKTCHHLLLLTIKTEVKLAVHDEDRMGASLLRLHFHDCFVQGCDASVLLDDTTNFIGEKMARPNNNSLRGFDVIDKIKSKVERLCPNTVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLSLANSDIPGGGSDLSVLVNTFSNKGFTVSEMVALSGSHTIGQASCRTFRNRIYNETNIDSSFATSLQANCPTAGGNLNLSPLDTTTPNKFDNAYYKNLQNLKGLLHSDQVLIDGSTIEQINSYVSRNSRFENDFADAMVKMANLSPLTGSSGEIRKICGRVN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01779 316 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 FunFam Peroxidase 162 295 - -
Trre14g01779 316 Gene3D - 27 312 - -
Trre14g01779 316 PANTHER PEROXIDASE 72-RELATED 17 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 Gene3D Peroxidase, domain 2 162 295 - -
Trre14g01779 316 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Trre14g01779 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601|GO:0042744
Trre14g01779 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Trre14g01779 316 FunFam Peroxidase 27 173 - -
Trre14g01779 316 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g01779 316 Pfam Peroxidase 42 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01779 Trre-Chr14 16258897 16261478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01779 20 316 Peroxidase AT5G05340 60.000 1.01e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01779 K00430 - gmx:100815142 446.817