Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01746 ATGTTGTCTAAAATATCAAGTTCAGAATATTTAGTGAATATAAATATTATAACCTTGTCATGTTTTGTGGCTTTGAATTGCTTTCTTCAAGAGTTTGGATCCAATGCTCAACTCATACCACAAGATGAAGTAAAATCACTACAAGCAATATCAGATAAACTAAAGAATGTGAAATGGAACGTCACAGAACGTTCCTGCATTGATGATGGAGGCTTCAATAATGACAAAATTGATACAGAGAATGACATCGTGAGGGATGTCTCATGCGATTGCAATTTCCAAAATAACACCGTTTGTCATGTTACTAGCATATTTCTAAACGGCCAAAATATAGCTGGAGTTATGCCTAGTGAATTTGGAAATCTTACTGAATTGAAAGTACTGTCGCTTTCGGGAAACGGATTAAGTGGTTCAATTCCCACAGAAATTGGTGATATTGCTAGCTTGGAGGATCTGGTCTTGGAAAATAATGAACTAGGTGGACCACTTCCTCCAAGTCTTGGAAATTTGAGCAAGTTGAAGAGACTGCTTCTTTCTTCAAATAATTTTGCAGGGACAATACCAGAATCATTTAGCAAACTAAAGAATCTCACTGCTTTTAGTATAGATGGAAGCAATTTATCTGGACAGATACCTAGTTTTATTGGGAACTGGACCAAACTTGATAAATTGAATATGCAGGGAACATCTATGGAAGGTCCTATTCCCTCCACCATATCTGAGTTGAAACTTTTGACGGAGTTGAGAATATCTGATTTAACAGGATCAACTATGACGTTTCCTAATCTGAAGGATTTGAAAAACTTGCAAATTTTGGAATTGAGAAATTGCTTAGTCACAGGTCCTATTCCTGATTACATTGGTGAAATGGAAAGTTTAGTTACTTTAGATCTAAGCTTCAATATGTTGACCGGTTCAATCCCAAATTCAATTCAGGGTTTAAAAAGCCTTGATTACATGTTTCTGACGAATAATTCTTTAAGTGGACCGATACAAGACTGGATACTGAACTTCAAAGTTAACATAGATTTATCTTATAACAATTTTACAAAGTCTTCTGCCACTAGCTGCCAACAGTTGAATCTGAACTTGGCTTCAAGCCAATCGTCTTCATCGGTCACTTCACCATCATTGTTTTGTTTGAAGAGGAACCTTCCTTGCGCAGGAAAACCTCAATATAATGCATTGTTCATAAATTGCGGAGGAGCTCAAGGGGATTATGATGGGAATGACTATTTTGGCGATCTGCAGAAAGATGGCATTTCAAATTTTGTTCTTAGAAATGAAGGACAATGGGCATATAGCAGCACAGGAGTGTATATGGGAAATGATCACGCGGATTATACGGCATCAAGTACATATAATATTAATGGCTCGGAATACTATAATACCGCTCGGATTTCACCTCTGTCACTTAAATACTATGGCCTTTGTATGGAGAAGGGAAGTTATAAAGTGAATCTCCATTTTGCTGAGATAATGTTTTCAGATGACAAGACTTTTGGACGACGCATATTTGACGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATTGTGGAAGAAGCTGGAGGAGTTGGAAAGGGCATCACTAAGGAATTTGTTGTCGAAGTCAACGACAACACGTTGGAAATTCATTTATACTGGGCAGGGAAAGGAACCACTGCTATTCCCGTCGAAGGTGTATATGGACCTCTTATATCTGCTATCACAGTAATACCAAACTTTAAAAATCATTCAAAAGGGTTGTCTGCTGGAGTTATCGTTGGAATTGTGGCTGCATCATGTATGCTTGTCATATTGATACTGGTTACCCTTTGGAAGATTGGTTTGCTTGGCAGAAAAGATATACGAGACAAAGACCTTTTTGATCTGAAAACAGGTTATTTCAGCTTAAGACAAATTAAAGCAGCGACTAATAACTTTGACCCTGCAAATAAGATTGGTGAAGGGGGATTTGGACCAGTATACAAGGGTATTCTGTCAAATGGTGATGTCATTGCTGTTAAGCAACTCTCCTCCAAATCAAATCAAGGGAACCGTGAATTTGTTAATGAAATCGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGTTGTTGTATTGAAGGAAAGCAGTTGCTACTGATATATGAATACATGGAAAACAATTGTCTTTCGCGTGCACTTTTTGGTCGTCAAGAACAGAAACTGCACTTAGATTGGCCTGCCAGAATGAAGATCTGTCTTGGCATAGCAAAGGGATTAGCTTATCTTCATGAAGAATCAGCGTTGAAAATAGTACACAGGGACATTAAGGCAAGTAATGTATTACTTGACAAGGATTTGAATGCCAAGATCTCTGACTTCGGTTTAGCTAAGCTTGATGAAGATGGGAATACCCATATCAGTACACGGATAGCAGGAACAATTGGATACATGGCTCCAGAATATGCTATGCGAGGTTACTTGACTGATAAGGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGCGGAAAAAGCCATATATATTTCAACCCAATGGAAGAGTTTGTATATCTTCTGGATTGGGCCTATGATCTCCAAGAGCAAGGAAAGATTTTGGAGTTAGTGGATCCAAGTCTTCATGGTTCAAGGTACTCCACAGAGGAAGCCATGAGAATGCTTAGTTTGGCATTCTTATGCACAAACACATCTGCCACTCTTAGGCCATCGATGTCATTGGTAGTGAGCATGCTTGAAGGAAAAACCCCGATCCAAGTGACATTAATCAATCGGAGGGAGAGCAGTCGACATGCAAGACTCAGCGCCTCCGAGTTGCTGTCACAAGATAGTCAAACATCAGCAAATAAGCCAAGGGTATGCTCCTCCATATCTCTTCAAAGTGAAGACGATTGTTCTTCAGGCAGTAAACTTCTTTGA 2931 0.3845 MLSKISSSEYLVNINIITLSCFVALNCFLQEFGSNAQLIPQDEVKSLQAISDKLKNVKWNVTERSCIDDGGFNNDKIDTENDIVRDVSCDCNFQNNTVCHVTSIFLNGQNIAGVMPSEFGNLTELKVLSLSGNGLSGSIPTEIGDIASLEDLVLENNELGGPLPPSLGNLSKLKRLLLSSNNFAGTIPESFSKLKNLTAFSIDGSNLSGQIPSFIGNWTKLDKLNMQGTSMEGPIPSTISELKLLTELRISDLTGSTMTFPNLKDLKNLQILELRNCLVTGPIPDYIGEMESLVTLDLSFNMLTGSIPNSIQGLKSLDYMFLTNNSLSGPIQDWILNFKVNIDLSYNNFTKSSATSCQQLNLNLASSQSSSSVTSPSLFCLKRNLPCAGKPQYNALFINCGGAQGDYDGNDYFGDLQKDGISNFVLRNEGQWAYSSTGVYMGNDHADYTASSTYNINGSEYYNTARISPLSLKYYGLCMEKGSYKVNLHFAEIMFSDDKTFGRRIFDVSIQGFKYLKDFNIVEEAGGVGKGITKEFVVEVNDNTLEIHLYWAGKGTTAIPVEGVYGPLISAITVIPNFKNHSKGLSAGVIVGIVAASCMLVILILVTLWKIGLLGRKDIRDKDLFDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGILSNGDVIAVKQLSSKSNQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLIYEYMENNCLSRALFGRQEQKLHLDWPARMKICLGIAKGLAYLHEESALKIVHRDIKASNVLLDKDLNAKISDFGLAKLDEDGNTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSHIYFNPMEEFVYLLDWAYDLQEQGKILELVDPSLHGSRYSTEEAMRMLSLAFLCTNTSATLRPSMSLVVSMLEGKTPIQVTLINRRESSRHARLSASELLSQDSQTSANKPRVCSSISLQSEDDCSSGSKLL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01746 976 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 615 719 - -
Trre14g01746 976 Gene3D Ribonuclease Inhibitor 173 255 IPR032675 -
Trre14g01746 976 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Trre14g01746 976 SUPERFAMILY L domain-like 98 350 - -
Trre14g01746 976 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 255 378 - -
Trre14g01746 976 Gene3D - 394 578 - -
Trre14g01746 976 SUPERFAMILY Protein kinase-like (PK-like) 626 917 IPR011009 -
Trre14g01746 976 SMART serkin_6 644 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01746 976 Gene3D Ribonuclease Inhibitor 256 371 IPR032675 -
Trre14g01746 976 Gene3D Phosphorylase Kinase; domain 1 613 719 - -
Trre14g01746 976 ProSiteProfiles Protein kinase domain profile. 644 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01746 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase 720 928 - -
Trre14g01746 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 189 254 - -
Trre14g01746 976 FunFam Leucine-rich repeat receptor protein kinase EMS1 95 188 - -
Trre14g01746 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Trre14g01746 976 Pfam Protein tyrosine and serine/threonine kinase 648 913 IPR001245 GO:0004672|GO:0006468
Trre14g01746 976 Gene3D Transferase(Phosphotransferase) domain 1 720 931 - -
Trre14g01746 976 Pfam Malectin domain 395 572 IPR021720 -
Trre14g01746 976 CDD STKc_IRAK 650 918 - -
Trre14g01746 976 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 393 577 - -
Trre14g01746 976 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 46 946 - -
Trre14g01746 976 Gene3D Ribonuclease Inhibitor 45 172 IPR032675 -
Trre14g01746 976 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Trre14g01746 976 Pfam Leucine rich repeat 268 327 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01746 Trre-Chr14 15767499 15783796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01746 29 953 Receptor kinase-like Gene Family AT1G53440 59.067 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01746 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01746 - - gmx:100815226 1387.86