Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01745 ATGACCATGGATGAACAACATCATCATCATAGTAACTGGGAAACTTCTGAACTTAATAATAATAATAATAATAATAATTATAATCATAATCATAGTCTTGTTGAATTTAATGATGTTCCTAAATTCAAATCTGTTCAACCACCTTCTCTTCCTATCTCTCAATCACCTTCTTTTCATCTACCCTTTTCATCTACTTTCAGCCCATCTGATTTTTTGATCTCACCTTTCTTTCTTTCTTCTCCAAATGTTTTTGCTTCTCCAACTACTGAGGCTTTTGCTAACCAGAGCTTTAACTGGAATAAGAACAGTTTAGGAGAAGAAGAGCAACAAGGTGATAAGAAAGATGAGAAAAACTATTCTGATTTCTCTTTTCCTACTCAAACTAAGCCTGAATCTGTTCTTCAATCTTCCTCAGACATGTTTCAACTGCAGGAACAAGCTAAGAAACAAAACATATGGAAATTCAGTGAACCTACAAAGCAAGCCGATTTTTTATCCGAAAGGACAGAGTCAAAATCTGAATTCCAATCAACTCAGAACTTTTCCTCAGAATTGGCACTAGTTAAACCAGAAACACATAATAACTCGGTTAATGGATCTGGTTATTATAATTACAATAACAATAACTACAATAACGCATCTCAATCCGTTAGAGAACAAAGGAGATCAGAAGATGGGTATAACTGGAGAAAATACGGACAGAAACAAGTGAAAGGAAGCGAAAATCCACGTAGTTATTACAAGTGCACGCATTTGAATTGCTCAATGAAGAAGAAAGTTGAGAAGGATTTAGATGGACAAATTACTGAAATTGTATATAAGGGAACTCATAATCACCCTAAGCCTCAGTCAAATAGAAGAACAAGCTCTCAACCAACTTCGTCATGTACTAACTCCGGAATTTCTGATCAATCAGTGATGGATCATGTCTCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGAGTTCGAGCAAACTTCACAAACAAGTTATTCTGGTGGAGGAAATGATGACGCAAATGCACCGGAAGCCAAAAGATGGAAGGGTGATAATGAAAATGATGTCTATTCTGCATCAGCTAGTAGAACCGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTTGTTAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACTGCACCTGGTTGTACAGTTCGAAAGCACGTTGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACGTACGAAGGGAAACACAACCATGATGTACCAGCTGCGCGTGGTGCTGCAGGTTATAACATGAACAGAAGTTCTATGAACAACGCCATCGTACCGGCACCTATTAGGCCTTCAGCAGTGAATTGCTATTCTAACTCATCAAGTTTCACAAATTCATTTTATAATAAGACCGGTCTGCCTACAAACGGAAATCAAGAGTCATTTCAACCGGACATGTTGCAGAGTCAAGGAAGTTTTGGATATTCATCGGCCAATCATTCACAATACTCAGATGCTGGATACCTAAAGGCCAAGGATGAGAGGAAGGATGACTCATTCCTTCAGTCATTTCTGTCGAAAGACTTCTAA 1641 0.379 MTMDEQHHHHSNWETSELNNNNNNNNYNHNHSLVEFNDVPKFKSVQPPSLPISQSPSFHLPFSSTFSPSDFLISPFFLSSPNVFASPTTEAFANQSFNWNKNSLGEEEQQGDKKDEKNYSDFSFPTQTKPESVLQSSSDMFQLQEQAKKQNIWKFSEPTKQADFLSERTESKSEFQSTQNFSSELALVKPETHNNSVNGSGYYNYNNNNYNNASQSVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHLNCSMKKKVEKDLDGQITEIVYKGTHNHPKPQSNRRTSSQPTSSCTNSGISDQSVMDHVSIQEDSSASVGEEEFEQTSQTSYSGGGNDDANAPEAKRWKGDNENDVYSASASRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCTVRKHVERAAHDIKAVITTYEGKHNHDVPAARGAAGYNMNRSSMNNAIVPAPIRPSAVNCYSNSSSFTNSFYNKTGLPTNGNQESFQPDMLQSQGSFGYSSANHSQYSDAGYLKAKDERKDDSFLQSFLSKDF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01745 546 Gene3D WRKY domain 208 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 MobiDBLite consensus disorder prediction 198 217 - -
Trre14g01745 546 ProSiteProfiles WRKY domain profile. 218 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 Gene3D WRKY domain 369 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 Pfam WRKY DNA -binding domain 383 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 138 474 IPR044810 GO:0003700
Trre14g01745 546 FunFam WRKY transcription factor 212 283 - -
Trre14g01745 546 MobiDBLite consensus disorder prediction 106 120 - -
Trre14g01745 546 ProSiteProfiles WRKY domain profile. 377 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 SMART WRKY_cls 382 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 MobiDBLite consensus disorder prediction 491 516 - -
Trre14g01745 546 MobiDBLite consensus disorder prediction 104 130 - -
Trre14g01745 546 FunFam WRKY transcription factor 33 369 435 - -
Trre14g01745 546 SUPERFAMILY WRKY DNA-binding domain 219 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01745 546 MobiDBLite consensus disorder prediction 1 28 - -
Trre14g01745 546 MobiDBLite consensus disorder prediction 274 366 - -
Trre14g01745 546 MobiDBLite consensus disorder prediction 278 338 - -
Trre14g01745 546 MobiDBLite consensus disorder prediction 198 243 - -
Trre14g01745 546 SUPERFAMILY WRKY DNA-binding domain 374 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01745 Trre-Chr14 15724292 15727219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01745 32 542 WRKY Transcription Factor Family AT2G38470 42.934 3.87e-113 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g01745 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01745 K13424 - gmx:100776837 705.286