Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01744 ATGACCATGGATGAACAACATCATCATCATAGTAACTGGGAAACTTCTGAACTTAATAATAATAATAATAATAATAATTATAATCATAATCATAGTCTTGTTGAATTTAATGATGTTCCTAAATTCAAATCTGTTCAACCACCTTCTCTTCCTATCTCTCAATCACCTTCTTTTCATCTACCCTTTTCATCTACTTTCAGCCCATCTGATTTTTTGATCTCACCTTTCTTTCTTTCTTCTCCAAATGTTTTTGCTTCTCCAACTACTGAGGCTTTTGCTAACCAGAGCTTTAACTGGAATAAGAACAGTTTAGGAGAAGAAGAGCAACAAGGTGATAAGAAAGATGAGAAAAACTATTCTGATTTCTCTTTTCCTACTCAAACTAAGCCTGAATCTGTTCTTCAATCTTCCTCAGACATGTTTCAACTGGAACAAGCTAAGAAACAAAACATATGGAAATTCAGTGAACCTACAAAGCAAGCCGATTTTTTATCCGAAAGGACAGAGTCAAAATCTGAATTCCAATCAACTCAGAACTTTTCCTCAGAATTGGCACTAGTTAAACCAGAAACACATAATAACTCGGTTAATGGATCTGGTTATTATAATTACAATAACAATAACTACAATAACGCATCTCAATCCGTTAGAGAACAAAGGAGATCAGAAGATGGGTATAACTGGAGAAAATACGGACAGAAACAAGTGAAAGGAAGCGAAAATCCACGTAGTTATTACAAGTGCACGCATTTGAATTGCTCAATGAAGAAGAAAGTTGAGAAGGATTTAGATGGACAAATTACTGAAATTGTATATAAGGGAACTCATAATCACCCTAAGCCTCAGTCAAATAGAAGAACAAGCTCTCAACCAACTTCGTCATGTACTAACTCCGGAATTTCTGATCAATCAGTGATGGATCATGTCTCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGAGTTCGAGCAAACTTCACAAACAAGTTATTCTGGTGGAGGAAATGATGACGCAAATGCACCGGAAGCCAAAAGATGGAAGGGTGATAATGAAAATGATGTCTATTCTGCATCAGCTAGTAGAACCGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTTGTTAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACTGCACCTGGTTGTACAGTTCGAAAGCACGTTGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACGTACGAAGGGAAACACAACCATGATGTACCAGCTGCGCGTGGTGCTGCAGGTTATAACATGAACAGAAGTTCTATGAACAACGCCATCGTACCGGCACCTATTAGGCCTTCAGCAGTGAATTGCTATTCTAACTCATCAAGTTTCACAAATTCATTTTATAATAAGACCGGTCTGCCTACAAACGGAAATCAAGAGTCATTTCAACCGGACATGTTGCAGAGTCAAGGAAGTTTTGGATATTCATCGGCCAATCATTCACAATACTCAGATGCTGGATACCTAAAGGCCAAGGATGAGAGGAAGGATGACTCATTCCTTCAGTCATTTCTGTCGAAAGACTTCTAA 1638 0.3785 MTMDEQHHHHSNWETSELNNNNNNNNYNHNHSLVEFNDVPKFKSVQPPSLPISQSPSFHLPFSSTFSPSDFLISPFFLSSPNVFASPTTEAFANQSFNWNKNSLGEEEQQGDKKDEKNYSDFSFPTQTKPESVLQSSSDMFQLEQAKKQNIWKFSEPTKQADFLSERTESKSEFQSTQNFSSELALVKPETHNNSVNGSGYYNYNNNNYNNASQSVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHLNCSMKKKVEKDLDGQITEIVYKGTHNHPKPQSNRRTSSQPTSSCTNSGISDQSVMDHVSIQEDSSASVGEEEFEQTSQTSYSGGGNDDANAPEAKRWKGDNENDVYSASASRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCTVRKHVERAAHDIKAVITTYEGKHNHDVPAARGAAGYNMNRSSMNNAIVPAPIRPSAVNCYSNSSSFTNSFYNKTGLPTNGNQESFQPDMLQSQGSFGYSSANHSQYSDAGYLKAKDERKDDSFLQSFLSKDF 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01744 545 ProSiteProfiles WRKY domain profile. 376 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 MobiDBLite consensus disorder prediction 490 515 - -
Trre14g01744 545 MobiDBLite consensus disorder prediction 273 365 - -
Trre14g01744 545 MobiDBLite consensus disorder prediction 277 337 - -
Trre14g01744 545 MobiDBLite consensus disorder prediction 209 242 - -
Trre14g01744 545 Gene3D WRKY domain 207 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 Pfam WRKY DNA -binding domain 382 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 MobiDBLite consensus disorder prediction 106 120 - -
Trre14g01744 545 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 138 471 IPR044810 GO:0003700
Trre14g01744 545 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 Gene3D WRKY domain 368 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 FunFam WRKY transcription factor 211 282 - -
Trre14g01744 545 SUPERFAMILY WRKY DNA-binding domain 373 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 FunFam WRKY transcription factor 33 368 434 - -
Trre14g01744 545 MobiDBLite consensus disorder prediction 104 130 - -
Trre14g01744 545 MobiDBLite consensus disorder prediction 1 28 - -
Trre14g01744 545 SUPERFAMILY WRKY DNA-binding domain 218 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 SMART WRKY_cls 381 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01744 545 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01744 Trre-Chr14 15724292 15727219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01744 32 541 WRKY Transcription Factor Family AT2G38470 42.936 1.82e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g01744 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01744 K13424 - gmx:100776837 709.909