Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01723 ATGGGCAAGAAACAGAAGCCGCAACAGATTCTTCTTCCGCCGGACCTCCCACCGGAGATTCCTGACGAAGAAGTCGAGTTTTCCGACGACGATATTAAATTCGTCAACGAAAATCGCGCCTATGCTTCTTTGCTTTCCAACTTGGACACTCAATCAATCAACAAGCATGTTACACGGGTTGCTGATGCCAAAGAAGATGCTTTGGAGAAACTATATGAGCAACGCAGGCAAAAGACTGCTCTCAAGAAAGAGAAAGAAGAAACAGGTTTGCAGGTTGATCGAGTAGATGCTCTTCCAGTCAAGACATTAGATGGAAAAGTCTATTATCGGACAGCTACGAAGATGGCACCAGTAAATGCTCCAAGTGAAGAGGAAACTGGAGAGGATGGCAATGAAGACACAGGTTTAGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATTAGAAAAGAAGGAAAAAAACAAGGGAAAGAGGTGGCTAAAGAGGAAGTGAAAGAAGCACCACAGGCAGCAGTTTTGGCCGAGGTTAAAGAAGATCTTAAAGTTGAAGAGGATTTTGAAAGTAAAAAGTGTAAACTTGCAGAGTTTGGAAATGCCTTGCTAACAGACCCAGAGTCCAATATTAAATTTCTGAAGGAAATGGTACAGTTATCTAAAGACAGTGATGACACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAGAGATATTATACCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAACAAGAAATGAAGGTTTCAAAGACCGTTAAAAAGATGCGTTTTTATGAATCAACTCTCCTCTCTGCATACAAGGCTTACTTGCAAAGGCTGATAGCCTTAGAAAAGAAGCCTTTATTTCAGCTTGTCGCAGTTCGTTGTCTTTGTTCTTTGCTTGATTCAAATCCCCATTTCAACTTTCGTGAAACCTTGTTGGATGCAACTGTCAGAAACATAAGCTCCAGTAATGAGGCCATAAGGCAACTTTGCTGTTCCACAATTAAGTCACTCTTTACAAATGAGGGTAAACATGGTGGTGAAGCTACTGTGGAGGCTGTGCGGTTGATTTCTTATAAGGTTAAAGATCATAATTGCCAGTTGCACCCTGATTCCATTGAGGTTTTCTTGTCTCTTTCATTTGATGAGGATCTTGCAAAGGCTGAAAGGATGGATAAGGATCAGAAATTTAAAAACAAGAAAGGTAAGAAAAGAAAAAACACGGAGGCATCAAATCAGTTGCCGGAAAATGACAGAAAGAAAAGTAGGCAAGAGTCGATTTCTAAGACAAGAGAGGAGGTTGAAGCTGAGTACAAGGCTGCTTCCTTTACCAAGGATGCTATGGAGAAGAGACAAATGCAAACACAAACACTCTCTGCTGTGTTTGAGACTTACTTTCGCATTTTGAAGCATACTATGCAGTCCATAGTTGCCAGGCCTGAAGCAAACCCTGGGGTACTTTCAGCTGCAGTTGGAGTGGAACCCCACCCATTGCTGGATCCATGTCTGAAGGGACTGGCAAAATTTTCGCACCTGATTGACCTTGATTTCTTGGGTGATCTAATGAAGCATTTGAAAATACTTGCTTCTGGAGGTAGCAAATCAGACAACACATCTGAGGATTTTCCTAAATGTCTGACCGTATCTGAACGCCTCCAATGTTGCATCGTTGCTTTCAAAGTGATGCGAACCAATCTTGATGCCTTGAATGTTGATTTACAAGACTTCACTGTCCATCTTTACAATCTTGTACTTGAATACAGGCCTGGAAGGGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATCATGTTGTGTGACGATAGGCAGCATGACATGCAAAAAGCTGCTGCATTTATAAAACGCTTGGCTACATTGTCATTGTGTGTTGGATCTGCAGATTCCATGGCTGCTTTGGTCACGGTAAAGCATCTCCTTCTGAAGAATGTCAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGCACAATTCCGAAATATCTACCATATTCGACAGATCCTAATTTAAGCGGCGCCCTAGCCTCGGTACTTTGGGAACTTTGTCTTTTGTCCAAACACTATCATCCAACCATATCAGCAATGGCGACGGGCATTTCAAGCATGAGCACTGAAAACCAAGTCTTCCTCTCCAAGTCCTCTCCTCAACAAGCTTTCAAGGACATGTCTATTGACCAAGAACTATGTTTTGAACAAAGTGGCAGTATTAAATTAAACAACAAGAAGAGACGATTGAATGGCAATGCTACATCAAATTCCATTGGTTCCACAACAGTAACGAGTTCATTCAATGAAGATGACTTGCGAAAAAAGTTTAGTTCCCACTTTATGGTTCTTCATGATATCAAGGAGAACGAAAGGTTGAGAAGTAAGTTGGATAAGACTGCAAAATCACTTCAGCTATATGAACAATATAAGAAACAAAAGAAGAAACGATCAAAACCTAGTAGTTGA 2508 0.4135 MGKKQKPQQILLPPDLPPEIPDEEVEFSDDDIKFVNENRAYASLLSNLDTQSINKHVTRVADAKEDALEKLYEQRRQKTALKKEKEETGLQVDRVDALPVKTLDGKVYYRTATKMAPVNAPSEEETGEDGNEDTGLVKLTKAEKRAKLKKIRKEGKKQGKEVAKEEVKEAPQAAVLAEVKEDLKVEEDFESKKCKLAEFGNALLTDPESNIKFLKEMVQLSKDSDDTIVKLGLLSLLAVFRDIIPGYRIRLPTEKEQEMKVSKTVKKMRFYESTLLSAYKAYLQRLIALEKKPLFQLVAVRCLCSLLDSNPHFNFRETLLDATVRNISSSNEAIRQLCCSTIKSLFTNEGKHGGEATVEAVRLISYKVKDHNCQLHPDSIEVFLSLSFDEDLAKAERMDKDQKFKNKKGKKRKNTEASNQLPENDRKKSRQESISKTREEVEAEYKAASFTKDAMEKRQMQTQTLSAVFETYFRILKHTMQSIVARPEANPGVLSAAVGVEPHPLLDPCLKGLAKFSHLIDLDFLGDLMKHLKILASGGSKSDNTSEDFPKCLTVSERLQCCIVAFKVMRTNLDALNVDLQDFTVHLYNLVLEYRPGRDQGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATLSLCVGSADSMAALVTVKHLLLKNVKCRNLLENDTGGGSVSGTIPKYLPYSTDPNLSGALASVLWELCLLSKHYHPTISAMATGISSMSTENQVFLSKSSPQQAFKDMSIDQELCFEQSGSIKLNNKKRRLNGNATSNSIGSTTVTSSFNEDDLRKKFSSHFMVLHDIKENERLRSKLDKTAKSLQLYEQYKKQKKKRSKPSS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01723 835 MobiDBLite consensus disorder prediction 413 439 - -
Trre14g01723 835 MobiDBLite consensus disorder prediction 1 20 - -
Trre14g01723 835 Pfam CBF/Mak21 family 559 714 IPR005612 -
Trre14g01723 835 Coils Coil 438 458 - -
Trre14g01723 835 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Trre14g01723 835 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 821 IPR016903 -
Trre14g01723 835 Coils Coil 64 88 - -
Trre14g01723 835 MobiDBLite consensus disorder prediction 399 439 - -
Trre14g01723 835 SUPERFAMILY ARM repeat 199 533 IPR016024 -
Trre14g01723 835 PIRSF Noc3 2 829 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01723 Trre-Chr14 15531481 15541351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01723 1 810 Core DNA Replication Machinery Family AT1G79150 57.021 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01723 K14834 - gmx:100794797 1210.67