Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01722 ATGAAGATTGATACCGTTACTGGAGAAAAGAAATCGCACAAAAGACGCAGTGGTGGAAGAAGTGATTCAGTAGAAGACACTCTTGAGAAGTGGAAGAACTACAACAAACAGCAACAACAAAAGCTTGGTTGTGGAGATAATGGAGCAGAAAAGATTCACAAAGTTCCTGCAAAAGGTTCAAGAAAAGGGTGCATGAGAGGTAAAGGTGGTCCTCAGAATTCAGATTGCAACTTCAGAGGAGTTAGACAAAGGATTTGGGGTAAATGGGTTGCTGAGATTCGCGAACCAATCAATGGTAAACATGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCTCTACAGCACATGAAGCTGCTCTTGCTTATGATAAAGCAGCTAAAGCTATGTATGGACCTAGTGCTCGTTTGAATTTTCCTAATGGATCACCATCATCATCATCATCATCATCATCAAGTGGTGGATCTGCAGATTCTTTGAATGGTGAGGAGGATCTTGCAAAAGCTGAAGAGTTGGAGGGTAATCTTCATCAGTCTGATGAAGAGAATAAGATTCTTTCTAAGGATTTTGTTGCTGATGACGACTCGGTAGAGGAATCAAAGGAAGTGATGATAGTTGGTACTGTCCATTCTCAAACTAATAAGAAATGTAGGAAAATGGTTCATCAAGGGTCTTACAAGAATGTTAGGTCTGAAAAATCTGTGGAAAGTGAACAACTAGAGAGTGAATCACAGAAGGTTTTGGAAAATTCTGGCATAGGTAGGTGTTATCATGTGCAGAAGGAGCCTATAGATTCATCCATGGACTCAGGAGCTGTTTGTAGACCTTCTGATATAGCAGAAAGTGGGATTCTGGTGAAGAATGAAGAAACAATACGACGATCGGTGGAGGATTTGAAATCCTTTGAGTTGAGCAGCAACAATATTTTCTTTGGAAACCTGCACAGTATTCTTCCAGATAGCAATTCAAGACCAGATTCTGAGTATTTTAACATAAAAACCGAGGCTTCTCTAGCGAAGAAACATAAGAAGGAAGTAATTGGACATTTCTTGAACCATGCTCAATCACAAAATGAGCAAAATAAAAATGGAGGTTTTGGTGAGATGAAAAGTGAACTTAAGGGATTGGAATGCAAGCTGAGAGGCCAATATATTGATTGTAATAGCGATGAAGCACAAATAGTACCTTACGTACAGGGAATTAATCTGTCTGATGGCGGCGGTGTTGGAACAATTGAAAGGATGTCCCAAGTTGAAGCTTTGAACAACAATACTAATAAAAACACTAAATTAAAAGAGAGAGGAAATAATGGATGTGCACTGCATGGATTTAGTTCAGGGCAAAGTAGGAAGCTGAGTGATCTTTCTCAGCAGCTGCAGAGATTGGGTGGTTACTTGCCTGAAAATTGGAATAATATGCAGTTTGCAGATCTTGAAGTTGGTTATGATTATAGTTTCTTAAAACCTGATTATGATTTTGGTTTATTAGAAGAGAAGAAGTTATTAGATATATGTTTTTCACATATAGGATCTTGA 1539 0.3866 MKIDTVTGEKKSHKRRSGGRSDSVEDTLEKWKNYNKQQQQKLGCGDNGAEKIHKVPAKGSRKGCMRGKGGPQNSDCNFRGVRQRIWGKWVAEIREPINGKHVGEKANRLWLGTFSTAHEAALAYDKAAKAMYGPSARLNFPNGSPSSSSSSSSSGGSADSLNGEEDLAKAEELEGNLHQSDEENKILSKDFVADDDSVEESKEVMIVGTVHSQTNKKCRKMVHQGSYKNVRSEKSVESEQLESESQKVLENSGIGRCYHVQKEPIDSSMDSGAVCRPSDIAESGILVKNEETIRRSVEDLKSFELSSNNIFFGNLHSILPDSNSRPDSEYFNIKTEASLAKKHKKEVIGHFLNHAQSQNEQNKNGGFGEMKSELKGLECKLRGQYIDCNSDEAQIVPYVQGINLSDGGGVGTIERMSQVEALNNNTNKNTKLKERGNNGCALHGFSSGQSRKLSDLSQQLQRLGGYLPENWNNMQFADLEVGYDYSFLKPDYDFGLLEEKKLLDICFSHIGS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01722 512 Coils Coil 170 190 - -
Trre14g01722 512 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 287 - -
Trre14g01722 512 MobiDBLite consensus disorder prediction 1 32 - -
Trre14g01722 512 SUPERFAMILY DNA-binding domain 77 141 IPR016177 GO:0003677
Trre14g01722 512 MobiDBLite consensus disorder prediction 141 160 - -
Trre14g01722 512 MobiDBLite consensus disorder prediction 1 76 - -
Trre14g01722 512 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Trre14g01722 512 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Trre14g01722 512 MobiDBLite consensus disorder prediction 141 162 - -
Trre14g01722 512 Pfam AP2 domain 76 133 IPR001471 GO:0003700|GO:0006355
Trre14g01722 512 MobiDBLite consensus disorder prediction 222 247 - -
Trre14g01722 512 FunFam Ethylene-responsive transcription factor 2 76 142 - -
Trre14g01722 512 SMART rav1_2 77 147 IPR001471 GO:0003700|GO:0006355
Trre14g01722 512 MobiDBLite consensus disorder prediction 226 244 - -
Trre14g01722 512 Gene3D AP2/ERF domain 77 142 IPR036955 GO:0003700|GO:0006355
Trre14g01722 512 CDD AP2 76 142 IPR001471 GO:0003700|GO:0006355
Trre14g01722 512 ProSiteProfiles AP2/ERF domain profile. 77 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01722 Trre-Chr14 15526355 15528511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01722 13 172 AP2-EREBP Transcription Factor Family AT2G40340 52.147 1.01e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre14g01722 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01722 - - tpra:123891882 889.797