Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01718 ATGCTTGTTACTATTTTCTTCATCTTTCTGTTCTGTTTCCATCCCGTCGTTTCTCTCACCTCCGACGGCCTCGCTCTTCTAACACTCAAATCCGCCGTCGACGGCGACGGCGCAACTGCATTCTCTGACTGGAACGAAGACGACATTACGCCGTGTCACTGGTCCGGCATTAGCTGTTCTAACATCTCCGGCGAGTCAGATTCTCGTGTTGTCGGTATCGCTCTCGCTGCAAAAGGCCTCCGTGGTTACCTCCCGTCGGAGCTCGGAAAATTAATCTATCTCCGTCGTCTGAGTCTTCATACTAATCTCTTCCACGGTTCCATTCCTGTTCAGCTCTTCAATGCCACCTCCCTCCACAGTATCTTCCTCCACGGTAACAACCTCTCCGGCAACATTTCTCCCTCCATATGCAACCTTCCACGTCTACAAAACCTTGACCTCTCAGAAAATTCACTCGCCGGAGTTATCCCGGAGTCTCTCGGAAACTGTTCCCAGCTTCAGCGACTCATTCTCGCGAGAAATAATTTTTCCGGCGATATTCCGGTGACTCCGTGGCCGAAGCTGAAAAGCCTCGTTCAGCTCGATCTTTCCGCGAATCTTCTAGAAGGTTCGATTCCAGACCAAATCGGGGATCTCAATTCCCTTACCGGAACCCTAAACCTCTCATTCAATCACCTGTCTGGTAAAGTTCCAAAATCTTTAGGAAAATTGCCGGTAACGGTTAGCTTCGATCTTCGAAACAACGATCTAAGCGGTGAAATTCCTCAAACCGGGTCGTTTTCGAATCAGGGACCCACCGCGTTTCTCAATAACCCGAAACTATGTGGGTTTCCTCTTCAAAAACAGTGCACCGGTTCAGCCCCGAGTGAACCAGGAACTAGTCCTGGTTTAACTCGACCGCACGTGAACCGGTCTAAGAAAGGGTTGAGTCCCGGTTTAATTATTATTATAACTGTGGCTGATGCTGCTGTTGTGGCATTGATTGGGCTTGTTGTTGTGTATGTGTATTGGAAGAAGAAAGATAACTCTAATGGGTGTAGTTGTACTTTGAAGAGAAAATTTGGTGGTAGTGGAAACAATGAGAGATCAAATTTGTGTTGTTTTTGTTCGTCATTAGGGTGTGTTAAAGGGTTTAAGAGTGATGATTCTGAGATGGAAGAGAGTGAGAAAGGAGGAGGAGGCGGCGGCGGCGGTGGTGGTGGGAGAGGGGAAAGTGAAGGTGAAGGTGAATTGGTAGCAATTGATAAAGGTTTTAGCTTTGAACTTGATGAGTTGTTAAGAGCTTCTGCATATGTATTAGGGAAAAGTGGGTTAGGGATTGTGTATAAGGTTGTGCTTGGGAATGGTGTACCTGTGGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAAAGGTATAAGGAATTTGCTGCTGAGGTTCAAGCTATTGGGAAAGTGAAACATCCTAATATTGTAAAGTTAAGAGCTTATTATTGGGCTCATGATGAAAAGCTTTTGATTAGTGATTTCATCTCTAATGGCAATTTGGCTAATGCTCTTAGAGGAAGAAATGGTCAACCATCTCCAAATCTTTCATGGTCAACTAGGCTGAAAATAGCCAAAGGAACAGCCAGGGGTTTAGCTTATCTCCATGAATGCAGTCCAAGAAAATTTGTCCACGGCGACCTCAAACCCTCCAATATCCTCCTTGACACAGACTTTCAACCTCTCATTTCTGATTTTGGTCTTAACCGGCTGATCAGCATCACTGGAAACAATCCTTCCACCGGTGGTTTTATGGGTGGTGCTCTTCCTTACTTGAAGTCATCGCAAACCGAACGAATCAACAACTATAAAGCACCTGAAGCTAAAGTACCAGGCTGCAGACCCACCCAAAAATGGGACGTGTATTCATTTGGTGTTGTTTTACTTGAATTGCTCACTGGCAAGTCCCCCGATTCTTCTCCAGGAGCATCAACTTCTGTGGAAGTACCTGACTTGGTTAGGTGGGTAAAGAAAGGGTTTGAACAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTTCAAGAAATCCATGCCAAGAAAGAAGTACTAGCTGTGTTCCATGTAGCACTATCATGCACCGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCTGATAATCTTGAAAGAATTTGA 2169 0.4564 MLVTIFFIFLFCFHPVVSLTSDGLALLTLKSAVDGDGATAFSDWNEDDITPCHWSGISCSNISGESDSRVVGIALAAKGLRGYLPSELGKLIYLRRLSLHTNLFHGSIPVQLFNATSLHSIFLHGNNLSGNISPSICNLPRLQNLDLSENSLAGVIPESLGNCSQLQRLILARNNFSGDIPVTPWPKLKSLVQLDLSANLLEGSIPDQIGDLNSLTGTLNLSFNHLSGKVPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNPKLCGFPLQKQCTGSAPSEPGTSPGLTRPHVNRSKKGLSPGLIIIITVADAAVVALIGLVVVYVYWKKKDNSNGCSCTLKRKFGGSGNNERSNLCCFCSSLGCVKGFKSDDSEMEESEKGGGGGGGGGGGRGESEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDLKPSNILLDTDFQPLISDFGLNRLISITGNNPSTGGFMGGALPYLKSSQTERINNYKAPEAKVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSVEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSDNLERI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01718 722 ProSiteProfiles Protein kinase domain profile. 427 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01718 722 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 19 186 - -
Trre14g01718 722 Gene3D Transferase(Phosphotransferase) domain 1 503 722 - -
Trre14g01718 722 FunFam Leucine-rich repeat receptor-like protein kinase 410 502 - -
Trre14g01718 722 Gene3D Ribonuclease Inhibitor 19 184 IPR032675 -
Trre14g01718 722 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Trre14g01718 722 FunFam Leucine-rich repeat receptor-like protein kinase 190 285 - -
Trre14g01718 722 CDD STKc_IRAK 433 722 - -
Trre14g01718 722 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 78 721 - -
Trre14g01718 722 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Trre14g01718 722 SUPERFAMILY Protein kinase-like (PK-like) 432 719 IPR011009 -
Trre14g01718 722 Pfam Protein kinase domain 432 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01718 722 Gene3D Phosphorylase Kinase; domain 1 410 502 - -
Trre14g01718 722 PRINTS Leucine-rich repeat signature 188 201 - -
Trre14g01718 722 PRINTS Leucine-rich repeat signature 142 155 - -
Trre14g01718 722 FunFam Os07g0541700 protein 510 593 - -
Trre14g01718 722 SMART serkin_6 431 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01718 722 SUPERFAMILY L domain-like 21 280 - -
Trre14g01718 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Trre14g01718 722 MobiDBLite consensus disorder prediction 383 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01718 Trre-Chr14 15505922 15510415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01718 15 722 Receptor kinase-like Gene Family AT1G67510 69.890 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre14g01718 Pkinase 3.5e-31 CL0016
TF S1Fa-like Trre14g01718 Pkinase 3.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01718 - - gmx:100795021 1134.78