Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01694 ATGAATCAGCCAGAGATTCTTCACTCTCCATGGCCATTAACCTATGCACAAATAGACTCATCAACTTTTGATCATCATCATCATCAAACCATGGCACATCTTGGTCACTATGATCCATATAGCATCATCATGGATGTCCATGTTGATGATTGTAATCCATATGGCATCATCATGGATGATGACCATGTTGATGTTGACTATGTTCCATATGGCATCATCATGGATGACCATGTTGATGATTATGAATTCAATACTCTACTAAGCACTTCAGAGAATAGTACTCTCTCTGAAATCTCCATGTTCAGCAATGATCATATCCAATTTCCAATTGATGAATCAGAAACCATGGAACTTTCATCACTCATGGAATTGGAATCTTTTGATTCAATTTCATGTCCACAAATTGTTGATATTCATGAATATGAATACCAAGAAGAAAGTGAAGGGAGCTTCCCTTCACAAAATTTTCACTGTAACCTCGAGGAACAAAGTTCAAATCCCATCAGAGACAGTTGCGAAATGAACACCGGTACTACTAATGATAATTTCCCTTCACAAAATTTCCAATATGATTCATGGAGTCCAACACAATCAATGAAATCAGATTTTTCCACAAATCAACAATCACTTATTCTTCTACAAGAAAACATGGAAATTGAAAATCAAGTGAGTCTTCCACACTTGATGGAAGCACATGGAGAAGCCTTGGAGAAAGGACAAAAAGCACTAGCAGAAGTTAATTTGAAGTGTATAAGCCAAAAAGTTACTCCAATGGGTGATTCTCTTGAAACACTTGCATTTTATTTGTCTCAAGAAGTTACAAATCATGGTGAATATCTAAAAGGCGAGGCTCAAAAGAACTTTGGTTCTTCTTTCAAGGCACTCTATCAAGGGAATTTAGTTGGAAAAGTTGCTCATTTTGCAGCTATTTCAGCAATTCTTGAGGCTGCTATGTTAGAAGATTGTGATGAAATCCATATAATAGATTTTTGTATTGGTAATGGTGTTCAATGGCCTTCTTTATTAGAGGCTGTTTCGAAAATGAACAAGAGATTGAAATTGACATCGATTAAATCGAGTGATAATGAAAATTCTGAATGTGTTTGGAATTTTGAGGATACCAAAAGGGAACTTTATGAGTATGCTAAATCATGTGGTTTGAAATTGATGGTGGAGGAAAAAGGATTGGAAGAATTGGTTAGTGAGATCAAAATAATGAACAAAAAGAGTGGAAAGAAAGTGTTTTTGGCTTTTAATTTGATGATTGGTCTTCCTCATATGGGAATGGTAAGAAACAGAAGAAAAAATTCTTTGGAATTTTTGAAAGTAGCTGAAGATTTGATCAAGAATTGTGGAAACAAGGGAATGATTACTTTTGGTGATGGTGATGTATTTGAGAAACTAAAAAACAGTTTGAATTTTAAGTCATTTTTTGAAGGGAATTTGGTGCATTATAAGGCCTTGTTGGAATCAATTGAATCACAGTTTTTAGAAAAATTCTCAAAAGCAAGAATTGCATGTGAAGTGCTTTTTGTTGCACCTTGTATATCTTCTTGTGATTGGTTACAAACATGGGAAGAGATGAAAATTGATGGTGATTTTCAGATTGAGATTAGCTTAGAAAGTGGAAGTTTAAGCAAAAATGTTTTGATGGAAGTCAAAGAAGTGTTGAGAGGGTGTGAAAGTTCTTATCAGGCTAGAATTGAAGGTGGAAATGAGAATGAACTTGTTTTGGAATGGAAAGGAACTCAATTATTAAGATTTTCCATATGGAAAAACTAA 1782 0.3446 MNQPEILHSPWPLTYAQIDSSTFDHHHHQTMAHLGHYDPYSIIMDVHVDDCNPYGIIMDDDHVDVDYVPYGIIMDDHVDDYEFNTLLSTSENSTLSEISMFSNDHIQFPIDESETMELSSLMELESFDSISCPQIVDIHEYEYQEESEGSFPSQNFHCNLEEQSSNPIRDSCEMNTGTTNDNFPSQNFQYDSWSPTQSMKSDFSTNQQSLILLQENMEIENQVSLPHLMEAHGEALEKGQKALAEVNLKCISQKVTPMGDSLETLAFYLSQEVTNHGEYLKGEAQKNFGSSFKALYQGNLVGKVAHFAAISAILEAAMLEDCDEIHIIDFCIGNGVQWPSLLEAVSKMNKRLKLTSIKSSDNENSECVWNFEDTKRELYEYAKSCGLKLMVEEKGLEELVSEIKIMNKKSGKKVFLAFNLMIGLPHMGMVRNRRKNSLEFLKVAEDLIKNCGNKGMITFGDGDVFEKLKNSLNFKSFFEGNLVHYKALLESIESQFLEKFSKARIACEVLFVAPCISSCDWLQTWEEMKIDGDFQIEISLESGSLSKNVLMEVKEVLRGCESSYQARIEGGNENELVLEWKGTQLLRFSIWKN 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01694 593 ProSiteProfiles GRAS family profile. 216 592 IPR005202 -
Trre14g01694 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 199 581 IPR005202 -
Trre14g01694 593 Pfam GRAS domain family 231 592 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01694 Trre-Chr14 15243762 15245543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01694 244 508 GRAS Transcription Factor Family AT5G66770 26.165 9.42e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g01694 GRAS 7.2e-29 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01694 - - tpra:123890000 1064.29