Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01690 ATGGATATGAAGGAGGAAGCAACATGTGGCTCAATATGTTCCAAGACAAGTGTTTCAATTAATGAAAATGGTTGTGAAATTAGTGAAGCAAGTGAAGATGAAGAAAGTAAGCAAAACAATAATGGAGGAATAAGCTCAAGCAATAGTACTATTGAAGAGAATTCTGAGAAGAAACCATCAGTGAGACCATATGTTAGATCCAAGTTTCCTAGGCTACGTTGGACTCCTGATCTTCATTTTCGATTTCTTCATGCTATTCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTGAGTATTGCTCATGTGAAGAGTCATTTGCAGATGTATAGAAGCAAGAAAGTAGTTGACACAAATCAAGTGTTAGGTGATCATAGGCTTCTAGACAATGGAGACAAAAATGTTTACAATCTCACACAACTTCCTATGCTTCAAGGCTATACTCCAAACCAAACTTCATCAAATAGATGTGGATATGGAGAGGCTTCTATTGCCATGTATGAAAACATGGTGCATATGAGTTCAATAAATGAGAGAACCAATAATAACAACATCAATATGCAATCTCATAATATTTTCCAAGTGGATGCTTCAAATTTTAGAGAATTATCAACAAGTAAAGTCCAAGAACCAAAAGATAATTTCCTCTCATTTTGTGGCAATGATCAATCTTTTAGATTAAGCAAGAAGGATGATCTTCAAGTGCAGCCTAGTGAACAAGAGCTCATGCCTAATGATAATCAAGTGGACTTAAAGACATTGAAAAGAAAAGCTTCAAATTTGGACCTTGATTTGGATCTATCACTTAAATTAAATTCAAGAATCATTGATGATGAGAACCAAGGAAGTATAGAGGATCATCATGAAGTTGGAAGTAATTTATCTCTCTCATTGTATTCTCAATCCTCTTATAATCTTTGCAAAAGAAACAAAGAAGGACAAGATGATTCTAAGGAGCAAGAGAAAAGAGTCAATATAGGTTTGGATCTAACCATATGA 1032 0.345 MDMKEEATCGSICSKTSVSINENGCEISEASEDEESKQNNNGGISSSNSTIEENSEKKPSVRPYVRSKFPRLRWTPDLHFRFLHAIQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQVLGDHRLLDNGDKNVYNLTQLPMLQGYTPNQTSSNRCGYGEASIAMYENMVHMSSINERTNNNNINMQSHNIFQVDASNFRELSTSKVQEPKDNFLSFCGNDQSFRLSKKDDLQVQPSEQELMPNDNQVDLKTLKRKASNLDLDLDLSLKLNSRIIDDENQGSIEDHHEVGSNLSLSLYSQSSYNLCKRNKEGQDDSKEQEKRVNIGLDLTI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01690 343 Pfam Myb-like DNA-binding domain 72 122 IPR001005 -
Trre14g01690 343 MobiDBLite consensus disorder prediction 24 62 - -
Trre14g01690 343 MobiDBLite consensus disorder prediction 321 336 - -
Trre14g01690 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 126 IPR017930 -
Trre14g01690 343 MobiDBLite consensus disorder prediction 321 343 - -
Trre14g01690 343 FunFam Myb family transcription factor 68 126 - -
Trre14g01690 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 125 IPR006447 GO:0003677
Trre14g01690 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 50 216 IPR046955 GO:0003700
Trre14g01690 343 SUPERFAMILY Homeodomain-like 70 124 IPR009057 -
Trre14g01690 343 Gene3D - 70 126 - -
Trre14g01690 343 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01690 Trre-Chr14 15202386 15204299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01690 61 126 G2-like Transcription Factor Family AT2G42660 77.273 7.24e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g01690 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01690 - - cam:101498576 375.555