Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01689 ATGGATATGAAGGAGGAAGCAACATGTGGCTCAATATGTTCCAAGACAAGTGTTTCAATTAATGAAAATGGTTGTGAAATTAGTGAAGCAAGTGAAGATGAAGAAAGTAAGCAAAACAATAATGGAGGAATAAGCTCAAGCAATAGTACTATTGAAGAGAATTCTGAGAAGAAACCATCAGTGAGACCATATGTTAGATCCAAGTTTCCTAGGCTACGTTGGACTCCTGATCTTCATTTTCGATTTCTTCATGCTATTCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTGAGTATTGCTCATGTGAAGAGTCATTTGCAGATGTATAGAAGCAAGAAAGTAGTTGACACAAATCAAGACAATGGAGACAAAAATGTTTACAATCTCACACAACTTCCTATGCTTCAAGGCTATACTCCAAACCAAACTTCATCAAATAGATGTGGATATGGAGAGGCTTCTATTGCCATGTATGAAAACATGGTGCATATGAGTTCAATAAATGAGAGAACCAATAATAACAACATCAATATGCAATCTCATAATATTTTCCAAGTGGATGCTTCAAATTTTAGAGAATTATCAACAAGTAAAGTCCAAGAACCAAAAGATAATTTCCTCTCATTTTGTGGCAATGATCAATCTTTTAGATTAAGCAAGAAGGATGATCTTCAAGTGCAGCCTAGTGAACAAGAGCTCATGCCTAATGATAATCAAGTGGACTTAAAGACATTGAAAAGAAAAGCTTCAAATTTGGACCTTGATTTGGATCTATCACTTAAATTAAATTCAAGAATCATTGATGATGAGAACCAAGGAAGTATAGAGGATCATCATGAAGTTGGAAGTAATTTATCTCTCTCATTGTATTCTCAATCCTCTTATAATCTTTGCAAAAGAAACAAAGAAGGACAAGATGATTCTAAGGAGCAAGAGAAAAGAGTCAATATAGGTTTGGATCTAACCATATGA 1008 0.3433 MDMKEEATCGSICSKTSVSINENGCEISEASEDEESKQNNNGGISSSNSTIEENSEKKPSVRPYVRSKFPRLRWTPDLHFRFLHAIQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQDNGDKNVYNLTQLPMLQGYTPNQTSSNRCGYGEASIAMYENMVHMSSINERTNNNNINMQSHNIFQVDASNFRELSTSKVQEPKDNFLSFCGNDQSFRLSKKDDLQVQPSEQELMPNDNQVDLKTLKRKASNLDLDLDLSLKLNSRIIDDENQGSIEDHHEVGSNLSLSLYSQSSYNLCKRNKEGQDDSKEQEKRVNIGLDLTI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01689 335 FunFam Myb family transcription factor 68 126 - -
Trre14g01689 335 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 35 267 IPR044847 GO:0000976|GO:0006355|GO:0010158
Trre14g01689 335 MobiDBLite consensus disorder prediction 24 62 - -
Trre14g01689 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 126 IPR017930 -
Trre14g01689 335 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 125 IPR006447 GO:0003677
Trre14g01689 335 Gene3D - 70 126 - -
Trre14g01689 335 SUPERFAMILY Homeodomain-like 70 124 IPR009057 -
Trre14g01689 335 MobiDBLite consensus disorder prediction 37 54 - -
Trre14g01689 335 Pfam Myb-like DNA-binding domain 72 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01689 Trre-Chr14 15202386 15204299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01689 61 126 G2-like Transcription Factor Family AT2G42660 77.273 4.39e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g01689 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01689 - - cam:101498576 358.992