Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01685 ATGGAAAAATCAAAATATTCAGATGCAATTTCAAAATATATCCAAAGTTTAGAGCTACCGAATGTTTCTTTGGATCATGGAGGAGTTGCCACAGCTTCTACTTCTTCTGTTGATACCATCCGTAGCAAGGGATACGATGTGTTCATCAGTTTCAGAGGCTCTGACACACGCAACACCTTTGTTGATCATCTCTACTCTCATCTCATCAGAAAAGGTATTTCCACTTTCAAAGATGACAAAGAGCTTCAGAAAGGTGAATCTATTTCACCTCAACTTTTGCAAGCAATTCAACATTCACGGCTTTCTATCGTTGTTTTCTCGAAAGATTATGCTTCATCTACTTGGTGTTTGGATGAAATGGCTGCTATTGCTGATTGCCGTGCTGAATTGAAACAAATTGTTTTTCCTGTTTTCTATGATGTTGATCCGTCTCATGTAAGAAAACAGAATGGAGTTTATGAAAATGCGTTTGTTTTGCACACTAAGCAGTTTGGATATGATTTCGAGAAGGTTACTCGGTGGAGGAGAGCTATGACTTGTATGGCTAAACTAGCTGGTTGGGATGTTAGAAATAAGCAAGAGTCTTCAGAGATTGAACACATTGTTCAGACTGTAATAAAAAAATTGGGTCATAAATTCTCAAAGTTTGCTAATGACCTTATTGGAATACAACCTCGTGTAGAAGCATTAGAAAGCCTTTTAAAACTAAACTCGAAGGAGGATGACATTCGAGTTTTGGGAGTATGGGGGATGGGTGGAATAGGGAAGACAACTCTTGCATCTGTCTTGTATGACAGAATCTCATATCAGTTTGATGCTAGCTGTTTTATTGAGAACTTTAGCGACATTTATAGAAATAGTGGTGGTAGACATGGCGGTGCTACTGCTGTGCATAAAAGAATTCTTTGTCAAACTATGGACGAAAAAAATCTAGATGTATACAGTCCTTCTGAAATATCGGGAATTGTAATGAATAGGCTGTGTGACACTAAGCTTCTTGTAGTTCTTGACGATGTTGAACAATATGAGCAACTGCTGGAATTAAATTTAGACCCGAAGTCGCTTCTTGCAGGAAGTAGAATAATCATAACCACTAGAGATGAGCATATTCTGAAACAGTATGAGGCAGATGAAATTTATGAGGCTTGCTTCATGGATGAAAATGATGCTCATAAACTTTTGTGTAGAAAAGCCTTCGAAAACGATCATTCAAACAGCACTTTTCAAGAGCTGGTTCATGAGGTACTAAAACATGCTCAACTTCTTCCATTAGCGATTGGAGTAATGGGTTCTTTCTTGTATAGACGAGATGCTATGCAGTGGAGAGCTACCTTAGATGGATGGCAGAATAATCCGAATAGTGGAATTATGAAAGTGCTTCAGACAAGTTTTGAGGGACTAGAGCAAAGAGAGAGGGAGATATTTCTGCATATTGCTTGTTTCTTTCAAGGGGAGAGGGACGATTATGTAAGGAAAATTTTAGATGCTTGTGGATTGTACCCAAATATTGGAATTTCACTTGTTGAAAAATCGCTCATAACCCTTAGAAACGAAGGAATTCATATGCATGTAATGTTGCAAGAGTTGGGGAAGCAAGTTGTGCGGGGACAACATTGTGACGAGCCAGGATTATGGAGTAGATTGTGGCTTTACAGGGATTTCCATCGTGCGATGAGGACTAAAACGGGAGAAATAGAAGTTAAAGCTATAGTTCTTGATCAAAAGGAGGATGGCTTCAGTTTCAATACGCTGAGTGCCGAAGATTTATCAAAAATGCAACGACTGAAACTGCTCATATTATATCATAAGAATTTTTCAGGAAATCCCATATCACTTTCCAATTCCCTATGTTATTTTTTATGGGATGGCTATCCTTTCACTTCTCTGCCATTAGATTTTCAGCCATCTGACCTTGTTGAATTGAATATGCCTAATAGCAGAGTGGAAACATTATGGACAGGCATCCAGCATTTCCCCTATTTGAAAAGGATGGATCTGAGCAACTCTAAAAATCTCAGTATGGCTCCAAGTTTTGAAGGGATCCAAAATCTTGAGCGGCTAGATTTTACAGGATGCATAAACTTGTTGCAGGTTGATCCGTCAATTGGACGTCTTAGAAAACTTGTATTCTTGAGTTTGCAGAACTGTACTAGTCTGGTAAGACTTGACTTCAACGGCGTATCCAGTTTAAGTTCGTTAAGAGTTCTTCGTCTCTCCGGGTGCACCAAACTTGAAAATTCTCCAGATTTTACCAGAGCATTTAATCTTGAGTACCTTGATATGGATCAATGTACAAGTTTATTCACAATTCATGAATCCATTCGGGCTCTTGTGAAGCTTAGATTTTTGAGTTTGAGATATTGCACAAATCTTGTTGGAATACCTGACGGCCTTAATAACATGGCATCTCTTACAACTCTAGATCTATATGGCTGCTCGAAATTTACCAATCTTCCCCTGAGATTTTTCGATTGTTCTTCTCCCCTGGAATCTTTGATTTTTCTGGACTTAAGCTTTTGCAATATTTCTGAATTACCTGATGCTATTGGAGACTTAAGGTGCTTAGAAAGACTAAATCTTCAGGGAAATAACTTTGTTACAACTCCTTCTACCATCAATAGGCTTTTCAGTCTAGCATACTTAAATTTGTCTCATTGCCACAATCTTGAATATTTGCCTAACCTCCCGACAGAAAGTGCTCCATTATTGGTGGGAAGATATTTTAAAACAACATCTGGATCCCGTGATAATAGGTCTGGATTATATGTTTTTGACTGTCCCAAGGTGGCCGAACGCTTGTTCTCGTGCAAAGAAGAGCTCCACAAAGATGTAATTGAAGACATTCAATTTGAATGGGTACAGAGACTAGTTAAGGAACCTCGTCACTTCCGGTGTGGCTTTGACATTGTTCTTCCTTGGCATTGGACAAACATGGACTGTCGTGAAAATCCTATTCCTACTATTCCACATTGGTTCGATCACCGATTTAACGGGGGTTTAAGAGTATGGACATCGACACATAGCTTTGATATGCATTTTGATTGGGTTGGTTTTGTTTTTTGTGTAGCATTTGAGGTGAATAACTGTTCTGAAGTATCTGGTTCATCACATCAATCACCCTCGTCATCACTGCCATATCCTTTTTATCTTTCTTTTGAAAGTGAACACACGGAAGAACGCTTTGAGATGCCACTTAATTTGGAAGGGAATGAGATTCATGGCTCAAAGTATCTTTGGATAATCTATATCTCGCTGGAACACTGTCACTTTATAAAAACAGGAGCTCTAATAAAATTTAAAGCCCGCCAAAATTTAATTATGAAGGAATGTGGGTTGCGCCTCATAACCATGGAAGACATCGAGGCCTCAGAATGGAAACCGAGAACAGATCTTCCTTTAATGTTTTATAAAATGGAAGAAACCAGCAGAAACAGCAGCTTTGAGCCAAAAATCCAACTTCCTTACAATTGGTTAGTTTCAGTTGAAGAATGTGTTGAGAATGATACAGCCAAGGGGAAAGAAATTGATCTCTTTAATCTAGGCCTTATGACAGGAAGACCGCAGTGA 3567 0.3872 MEKSKYSDAISKYIQSLELPNVSLDHGGVATASTSSVDTIRSKGYDVFISFRGSDTRNTFVDHLYSHLIRKGISTFKDDKELQKGESISPQLLQAIQHSRLSIVVFSKDYASSTWCLDEMAAIADCRAELKQIVFPVFYDVDPSHVRKQNGVYENAFVLHTKQFGYDFEKVTRWRRAMTCMAKLAGWDVRNKQESSEIEHIVQTVIKKLGHKFSKFANDLIGIQPRVEALESLLKLNSKEDDIRVLGVWGMGGIGKTTLASVLYDRISYQFDASCFIENFSDIYRNSGGRHGGATAVHKRILCQTMDEKNLDVYSPSEISGIVMNRLCDTKLLVVLDDVEQYEQLLELNLDPKSLLAGSRIIITTRDEHILKQYEADEIYEACFMDENDAHKLLCRKAFENDHSNSTFQELVHEVLKHAQLLPLAIGVMGSFLYRRDAMQWRATLDGWQNNPNSGIMKVLQTSFEGLEQREREIFLHIACFFQGERDDYVRKILDACGLYPNIGISLVEKSLITLRNEGIHMHVMLQELGKQVVRGQHCDEPGLWSRLWLYRDFHRAMRTKTGEIEVKAIVLDQKEDGFSFNTLSAEDLSKMQRLKLLILYHKNFSGNPISLSNSLCYFLWDGYPFTSLPLDFQPSDLVELNMPNSRVETLWTGIQHFPYLKRMDLSNSKNLSMAPSFEGIQNLERLDFTGCINLLQVDPSIGRLRKLVFLSLQNCTSLVRLDFNGVSSLSSLRVLRLSGCTKLENSPDFTRAFNLEYLDMDQCTSLFTIHESIRALVKLRFLSLRYCTNLVGIPDGLNNMASLTTLDLYGCSKFTNLPLRFFDCSSPLESLIFLDLSFCNISELPDAIGDLRCLERLNLQGNNFVTTPSTINRLFSLAYLNLSHCHNLEYLPNLPTESAPLLVGRYFKTTSGSRDNRSGLYVFDCPKVAERLFSCKEELHKDVIEDIQFEWVQRLVKEPRHFRCGFDIVLPWHWTNMDCRENPIPTIPHWFDHRFNGGLRVWTSTHSFDMHFDWVGFVFCVAFEVNNCSEVSGSSHQSPSSSLPYPFYLSFESEHTEERFEMPLNLEGNEIHGSKYLWIIYISLEHCHFIKTGALIKFKARQNLIMKECGLRLITMEDIEASEWKPRTDLPLMFYKMEETSRNSSFEPKIQLPYNWLVSVEECVENDTAKGKEIDLFNLGLMTGRPQ 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01685 1188 SUPERFAMILY L domain-like 580 898 - -
Trre14g01685 1188 Gene3D Ribonuclease Inhibitor 572 750 IPR032675 -
Trre14g01685 1188 Gene3D Ribonuclease Inhibitor 751 928 IPR032675 -
Trre14g01685 1188 SUPERFAMILY "Winged helix" DNA-binding domain 456 556 IPR036390 -
Trre14g01685 1188 Pfam NB-ARC domain 234 451 IPR002182 GO:0043531
Trre14g01685 1188 PRINTS Disease resistance protein signature 245 260 - -
Trre14g01685 1188 PRINTS Disease resistance protein signature 728 744 - -
Trre14g01685 1188 PRINTS Disease resistance protein signature 326 340 - -
Trre14g01685 1188 PRINTS Disease resistance protein signature 419 433 - -
Trre14g01685 1188 ProSiteProfiles TIR domain profile. 43 209 IPR000157 GO:0007165
Trre14g01685 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 478 IPR027417 -
Trre14g01685 1188 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 187 IPR035897 -
Trre14g01685 1188 Gene3D - 385 468 IPR042197 -
Trre14g01685 1188 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 747 IPR044974 GO:0006952
Trre14g01685 1188 Gene3D - 20 181 IPR035897 -
Trre14g01685 1188 Gene3D - 194 379 IPR027417 -
Trre14g01685 1188 Pfam Leucine Rich Repeat 637 656 IPR011713 -
Trre14g01685 1188 Pfam TIR domain 45 214 IPR000157 GO:0007165
Trre14g01685 1188 SMART till_3 44 184 IPR000157 GO:0007165
Trre14g01685 1188 FunFam Disease resistance protein (TIR-NBS-LRR class) 41 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01685 Trre-Chr14 15162072 15167381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01685 42 910 WRKY Transcription Factor Family AT4G12020 30.864 1.10e-84 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01685 - - mtr:25498786 1304.27