Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01677 ATGGATTCTGATAGCATCCAAAGCTATAGATATAAATATGACGTGTTTATCAGTTTTAGAGGTGTTGACACCCGCAATACCTTTGTTGACCATCTCTACGCTCATCTTACTAGAAAAGGTATTTTGGCCTTCAAGGATGACAAATTGCTTCAGAAAGGTGAATCAATTTCATCCCAACTTCTACAGGCAATTAAAGATTCGCGGGTTTCTATCGTTGTCTTCTCAAAAGATTACGCTTCGTCAACATGGTGTTTGGATGAAATGACTGCTATTGATGAATGCAGTAAAAGACTTAAACAAGTTGTTTTCCCTGTTTTCTGTGACATTGATCCATCTCATGTGAGAAAACAAAATGGGATATATGAGGATGCCTTTGTTTTACACACCGAGCAACTCAAACATGATCCAGACAAAGTTGCTCAATGGAAGAGTGCCATGACCTCTTTGGCCGGATCCGCAGGCTGGGATGTTAGGAATAGGCCAGAGTTTGTAGAGATTGAAGAAATTGTTGAGGCTGTGATAAAAAATTTGGGTCATAAATTCAAAGGGTCTGCTGATGACCTTATTGGAATACAACCTCGTTTAGAAGCATTAGAAAGCCTTTTCAAACTAAGCTCAAAGAATGGTGGTTTTCAAGTTTTAGGAATATGGGGGATGGGCGGAATAGGAAAGACAACTCTTGCGACTGTCTTGTATGACAGAATCTCATATCAGTTTGATGCTTGCTGTTACATTGAGAACGTTCGCAAAATTTATGAAGATGGTGGTTCTATTGCTGTGCAGAAACAAATTCTTTGTCGTACTTTAGAAGAAAAAGTTCTAGACCCACACAGTCCTTCTGAAATAGCAAGAATTGTAAGAAATAGGCTACATAACATAAAGCTCCTTGTAGTTCTTGACAATGTTGATCAAATTGAGCAAATCAATGAATTGGATATAAAACATGTATTGCTTCACCCAGAAAGTAGAATAATCATAATCACTAGAGATGAGCATATTCTTAAAGCATATGGAGCAGAGACAGTTTACGAGGTCGAATTGATGAATTGTAATGAAGCTCATAAACTTTTGTGTAGAAAAGCCTTCATAAGTGATTATTCAAGCAGTAAATTTGCAGAGCTGATTCCCGAGGTTTTAAAATATACTCAATGTCTTCCATTGGCAATTAGAGTAATAGGTTCTTTTTTGCATTCTCGAAATACCAAGCAGTGGAAAGCTACCTTGGATAGATTGCGGAATAGTCCACCGGACAAAATATTGAAAGTACTTCAGGTAAGTTATGATGGACTAGATGAGGAAGATAAAGAAATATTTCTGCACATTGCTTGTTTCTTTAAAGGAGAGAGGAAGGATTATGTCAGCCGAATTCTAGATGCTTGTGGATTGCAGCCTGATATTGGAATTCCACTTCTTGCTGAAAAATCACTCATAACCATTAAAAATGAGGAAATTCATATGCATGAAATGTTGCAAGAGTTGGGGAAGAAAATTGTTCGAGGACAACATCCAGATGAGCCAGGATTTTGGAGTAGGTTGTGGCTTTACCGGGATTTCCATTACGTGATGATGAACGAAAAGAAAGCAATAGAAGCTAAAGCCATAATTCTAAATCAGGAAGAGGACGATTTCAAATTTAATGAGTTGAGGGCTGAAGATTTGTCAAAAATGGAGCACCTGAAACTGCTCATATTAAATCATAATAACTTTTTAGGAACACCCTCATATCTTTCTAGTTCCCTACGTTATCTTTTGTGGAATGGTTACCCTTTCATTTCTTTGCCATCAAATTTTCAACCATATCACCTTGTTGAATTGAATTTGCCTGATAGCAGCGTCGAACAACTATGGACAGATACCCAGCAACTACCCTATTTGAGAAGGATGGATCTGAGCAACTCTAAAAACCTTAAGATGACCCCGTGCTTTAAAGGGATGCAGAATCTTGAGCGACTAGATCTTGCAGGATGCATAAAACTATGGCATGTGCATTCATCAATTGGACTTCTTACAAAACTTCGATTCTTGAGCTTGCAGAACTGTAGTAGTCTGGTCTGCTTTGATTTTGGCAGTGCATCAAAGTTAAGTTCTCTGAGAGTTCTGTGTCTCTCTGGTTGCACAAAACTTGAAAATACTCCCGATTTCAGGGGATTATCAAATCTTGAGTATCTTGACATGGATCGATGTACAAGTTTATATACGATTCATAAATCTATTGGGGATCTTACAAAGCTTAGATTCTTAAGTTTGAGATGCTGCACAAATCTGGTCAGAATACCTGACAGCTTTAACTATATGACATTTCTTATGACACTGGATCTATGCGGCTGCTCTAAATTTAAGAATCTTCCACTGGGATCTATATCCGGTTCTCAAACTCAACAATGGTTGATTTTTCTAGACTTAAGCTTTTGCAATATTTCTCAAGTACCTGATGCTATTGGAGAATTAAGGGGTTTGGAGAGACTAAATTTACAGGGCAATAACTTCACTACACTACCTTCTACCATCCAAAGACTTCGCAGTCTATCATATTTAAACTTGTCTCATTGCCACGAGTTTTGTCATATTCCTATTTTCTTAATTGTAAGTGGTCAAACAGATACAGTGGGAAGATATTTTAAAACAACGTCTGGATCCCGTGATCACAGGTCAGGATTGTATGCTTTTGATTGTCCCAAGCTGAAGTTAAACAGCACGCTGTTTTTTGAAACAATTGAAACCATAATTTTACCTGGTGAAGTCAGAAAAGGAGTGCCAAAATCAGAATACTTATCATTTATATGGCTAAAAAGACTAGTTAAGGAACCTCATCACTTCCGGTGTGGCTTTGACAGTATTCTTCCTTGGTTTGATTGCCGATATAGTGAAAATAGTGGTGTTCCTCTTTGGTTTGATCACCGATTTGACAGGGTTTCAATAATAAGGATAAAGGAGTCTGATCTTCCTGTCGACTGGCTCGGCTATGTTTTTTGTATAGTGTTTCAGGTGAATAATCATTCTGCAGTGTCTGGTTCTCAACATCAATCGCTTTCCTCAACACTTTCACATCCTTTTTATCTTTCTTTTGAAAGTGAACATACGGAAGAATGCTTTGAAATGCCACTTAATTTGGAGCTGGATATGGTTGATGGAAAAAATTATCTTTGGACAATCTATATCTCTCAGGACCACTGCCATTTTGTGAAAACAGGAGCGCAAATCACATTTAAAGCCAGCCAAAGATTGATTATGCAGGAATGGGGGCTACACATGCTAACCAAGAAAGACATAGAGGACTCAGAAGAGATAACACTAAGAAATAAGGATCTGAGTAAATGTCATCCTATACTGGTCATTGATAATGTAGAGGAAAGCAACCACAAATTTGAGCCTAAAATTCAGCTTCCTTACAACTGGTTATTATCGGACAAAGATGAAGCCGTGATTAATGAAACTAAGAGGAAAGAAATTGATCTTTCTAATCTAGGCCTTTTGACAGATTAG 3483 0.3767 MDSDSIQSYRYKYDVFISFRGVDTRNTFVDHLYAHLTRKGILAFKDDKLLQKGESISSQLLQAIKDSRVSIVVFSKDYASSTWCLDEMTAIDECSKRLKQVVFPVFCDIDPSHVRKQNGIYEDAFVLHTEQLKHDPDKVAQWKSAMTSLAGSAGWDVRNRPEFVEIEEIVEAVIKNLGHKFKGSADDLIGIQPRLEALESLFKLSSKNGGFQVLGIWGMGGIGKTTLATVLYDRISYQFDACCYIENVRKIYEDGGSIAVQKQILCRTLEEKVLDPHSPSEIARIVRNRLHNIKLLVVLDNVDQIEQINELDIKHVLLHPESRIIIITRDEHILKAYGAETVYEVELMNCNEAHKLLCRKAFISDYSSSKFAELIPEVLKYTQCLPLAIRVIGSFLHSRNTKQWKATLDRLRNSPPDKILKVLQVSYDGLDEEDKEIFLHIACFFKGERKDYVSRILDACGLQPDIGIPLLAEKSLITIKNEEIHMHEMLQELGKKIVRGQHPDEPGFWSRLWLYRDFHYVMMNEKKAIEAKAIILNQEEDDFKFNELRAEDLSKMEHLKLLILNHNNFLGTPSYLSSSLRYLLWNGYPFISLPSNFQPYHLVELNLPDSSVEQLWTDTQQLPYLRRMDLSNSKNLKMTPCFKGMQNLERLDLAGCIKLWHVHSSIGLLTKLRFLSLQNCSSLVCFDFGSASKLSSLRVLCLSGCTKLENTPDFRGLSNLEYLDMDRCTSLYTIHKSIGDLTKLRFLSLRCCTNLVRIPDSFNYMTFLMTLDLCGCSKFKNLPLGSISGSQTQQWLIFLDLSFCNISQVPDAIGELRGLERLNLQGNNFTTLPSTIQRLRSLSYLNLSHCHEFCHIPIFLIVSGQTDTVGRYFKTTSGSRDHRSGLYAFDCPKLKLNSTLFFETIETIILPGEVRKGVPKSEYLSFIWLKRLVKEPHHFRCGFDSILPWFDCRYSENSGVPLWFDHRFDRVSIIRIKESDLPVDWLGYVFCIVFQVNNHSAVSGSQHQSLSSTLSHPFYLSFESEHTEECFEMPLNLELDMVDGKNYLWTIYISQDHCHFVKTGAQITFKASQRLIMQEWGLHMLTKKDIEDSEEITLRNKDLSKCHPILVIDNVEESNHKFEPKIQLPYNWLLSDKDEAVINETKRKEIDLSNLGLLTD 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01677 1160 Gene3D Ribonuclease Inhibitor 522 690 IPR032675 -
Trre14g01677 1160 Pfam TIR domain 12 181 IPR000157 GO:0007165
Trre14g01677 1160 Gene3D - 10 183 IPR035897 -
Trre14g01677 1160 Gene3D - 184 342 IPR027417 -
Trre14g01677 1160 Pfam Leucine rich repeat 799 851 IPR001611 GO:0005515
Trre14g01677 1160 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Trre14g01677 1160 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Trre14g01677 1160 SUPERFAMILY L domain-like 550 858 - -
Trre14g01677 1160 SUPERFAMILY "Winged helix" DNA-binding domain 417 520 IPR036390 -
Trre14g01677 1160 Pfam NB-ARC domain 204 419 IPR002182 GO:0043531
Trre14g01677 1160 Pfam Leucine Rich Repeat 601 620 IPR011713 -
Trre14g01677 1160 Gene3D Ribonuclease Inhibitor 790 869 IPR032675 -
Trre14g01677 1160 Gene3D Ribonuclease Inhibitor 691 789 IPR032675 -
Trre14g01677 1160 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Trre14g01677 1160 SMART till_3 12 152 IPR000157 GO:0007165
Trre14g01677 1160 Gene3D - 348 431 IPR042197 -
Trre14g01677 1160 PRINTS Disease resistance protein signature 692 708 - -
Trre14g01677 1160 PRINTS Disease resistance protein signature 289 303 - -
Trre14g01677 1160 PRINTS Disease resistance protein signature 213 228 - -
Trre14g01677 1160 PRINTS Disease resistance protein signature 382 396 - -
Trre14g01677 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 441 IPR027417 -
Trre14g01677 1160 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 709 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01677 Trre-Chr14 15114037 15119064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01677 13 822 WRKY Transcription Factor Family AT4G12020 31.205 4.42e-87 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01677 - - mtr:25498786 1357.04