Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01670 ATGTCACTCTCTTGGCTATCCTCTCTCTTCCAAATAATTAGGGCCATAATCGATCGTCGGAGTCAGAGTTGGAGCCAGATCCAGAGAGGTATAGATTCTTGTTCTTGGAAGGATTCTAATAGCATCCAACAAAGCTATAGATACGATGTGTTTATCAGTTTCAGAGGTTCTGATACACGCAACACCTTTGTTGACCATCTCTACGCTCATCTCATTAGAAGAGGTATTTTCATTTTCAAAGATGACAAACAACTTCAGAAAGGTGAATCCATTTCACCTCAACTTCTACAGGCAATTCAACATTCACGGGTTTCTATTGTTGTCTTCTCAAAAGATTATGCTTCCTCGACTTGGTGTTTAGATGAAATGGCTGCTATTGCTGATTGCCGTGCTGAATTGAAACAAATTGTGTTTCCTGTTTTCTATGATGTTGATCCATCTCATGTGCGAAAACAGAATGGAGTTTATGAGAGTGCTTTTGTTTTACACACCGAGACATTCAAAGATGATCCACACAAGGTTGATGGGTGGAAGAGAGCTATGACTTGTTTCGCTGGGTCGACTGGTTGGGATGTCAGGAATAAGCCTGAAGTTGAAGAGATTGAAAATATTGTTGAGGCTGTAATAGAAAAGTTGGGTCATAAATTCTCAGGGTATGCTGACGACCTTATCGGAATACAACCTCAAGTAAAAGAATTAGAAACACTTTTAAAACTAAGCTCACATGATGACAATTTTCGAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACGACTCTTGCAACTGTCTTGTATGACAAAATCTCACATCACTACCAATATGGTGCTTGTTGTTTTATCCACAATGTTAGCACAATTTATAGAGATGGCGGTGCTATCGCTGTCCAGAAACAAATTCTTCATCAAACTCTGAAAGAAAAAAATCTGGATGCATACAGTCCCTCTGAAATATCTGGAATTATAACAAAGAGGCTATTTAACAGGAAACTCCTTGTCATTCTTGACGATGTTGATCAAATTGAGCAACTACAAAAATTGCATATAAAGACCAAATTGCTTTGTCCAGGAAGTAGAATAATCATAACCACTAGAGATGTGCATATTCTTGAATTGTATGGAGCGGATAGAATCCACAAGGTTGAATTGATGAATGATAATGATGCTCATGAACTTCTATGTAGAAAAGCTTTTAAAAGTGATAATTCAAACAGTGATTATGCAGAGCTTATTCCTAAGGTTTTAAAATATGCTCAAGGTCTTCCATTAGCAATTAGAGTAATGGGTTGTTTCTTGTATAATAGAAATACCACCCAATGGAGGGCTATCTTGAAAGGATTGGAGAATAATCCGGATAGTGGAATTATGAAAGTGCTACAGTCAAGTTTTGAGGGACTAGAGCTAAGAGAGAAAGAAATATTTTTGCACGTTGCTTGTTTCTTTGAAGGGGAGAGAGATGATTATGTAAGGAGAATTCTAGATGCTTGTGGATTGCAGCCTGAAATTGGAATTTCACTTATTGCTGAAAAATCGTTCATAATTATTAGAAATCAGGAAATTCATATGCATAAAATGTTGCAAGAGTTGGGAAAGAAAATTGTTCGGGAACAACATCCTGATGAGCCACGATTATGGAGTAGATTGTGGCTTTATCGTGATCTCCATGATGCAATGATTACAAAACTGGAAGCAATAAAAGCTAAAGCCATTATTCTAAATCAAAAGGAGGATGTTTCCAATTTCAATCAGCCGAAGGGTGAAGATTTATTGAAAATGGAAAACTTGAAATTGCTCATATTAGATCATTCAAATTTTTCAGGAAGCCCCAAATTTCTTTCTGATTCCCTATGCTATCTTATGTGGAAAGGTTACCCTTTCAAGTCTTTTCCATCAAAATTTCAACCATATAATCTTGTGGAATTGAATATGCCTAATAGCAACATTGAACAATTGTGGATAGGCATCCAGCGTCTCCCCAAATTAAAAAGGATGGACCTGAGCAACTCAAAAAATCTGAAGATGACTCCGTGCTTTGAAATGATACAAAATCTTGAGCGACTAGATCTTACAGGATGCATAAACTTGTTTGAGGTGCATCCATCAATTGGACTTCTTACAAAACTTGTATTCTTGAGTTTGCAGAACTGCAGTAGTCTAGTCACCCTTGATTTTGGAAATCCATCAAGATTAAGGTATCTAAAAGTCCTGCGTCTCTCTGATTGTACAAAACTCGAAAACACTCCGAATTTTGGAGGATTATCAAATCTCCAGTATCTTGATATGGATCGATGTGCAAGTTTATCCACGATTCATGAATTAATTGGGGATCTTGCAAAGCTTAAATTCCTAAGTTTGAGAGACTGCACAAATCTTGTTGAAATACCAGCACAAATAATGAGATTTCTTACAACTCTAGATCTTCATGGATGCTCTAAACTTATTAGGTTGTCATTGAGTCAGATTTCCACTTCTTCTCTGCAATCTTTGCTTTTTTTAGACTTAAGTTATTGCAATATTTCTGAAGTACCTGATGCTATTGGAGAATTAAGTTGTTTAGAAAGACTAAATCTTCAGGGAAATGACTTTACTGAACTTCCCTTCATAGATGATCTTCACAATCTATCATATCTAAACCTGTCTCATTGTCATAAGCTTCAAAGTTTGCCTGAGCTCCCAACAACAATTGGTGGTGCATCAGATTCAGTGGGAAGATATTTTAAAACAACATCTGGATCCCGTAACCATAGATCAGGATTATATGCGTTTGACACTCCCAGTTGCACGAAGTACATATCTATAGTCGAAGAACAGATAAATATGTGGATACTAAGATTACTTAAGGAACCTCTTTACTTTCGATGTGGCTTTGACCTTGTTCTTCCTTGGTATGAGGATGAGGAAGCTAGTGACATGCGAAGCATCTTCTGTTATTACTGGTTTAAAGGGGATTCAATAGTAAGGATAAATGACCCTGTTATGGATGTTGACTGGCATGGCTTTCTCTTTGGTGTAACATTTGAGTTAAATAATCATCCTAAACAATCTAGTTTTTCACATCAATCGCTCTCTTCGTCACTGCCACATCCTTTTTATCTTTCTTTTGAGAGTGAATACACAGAAGAACTCTTTGATATGTCACTTAATTTGGAATCAAACCAGGTTGATGGCTTAAACTATGTTTGGATGATCTATATATCTCGGGAACACTGCCATTTTGTGAAAACAGGAGCACACATCACATTTAAAGCCCGCCAAGGTTTACTTATCAAGAAATGGGGGTTGCGTGTCATAACCAAGAAAGACACACAGGGTTCAATGATGGAAATGAGTGTACCAGTACATCTTCCTTTAGAGAACGTGAAAGTAAAACAAAGAAGAAGAGGAAGCAGCAACTTTGTGCCTAAAATCCAACTTCCTTACAATTGGTTTGTTTCCGACGAAGATGAAGCTGAGAGGGATGAAGCCAAGGGAAAAGAAACTGATCTCTTTAATCTTGGCCTTTTAAGTGAAAGTTCACAATGA 3525 0.3719 MSLSWLSSLFQIIRAIIDRRSQSWSQIQRGIDSCSWKDSNSIQQSYRYDVFISFRGSDTRNTFVDHLYAHLIRRGIFIFKDDKQLQKGESISPQLLQAIQHSRVSIVVFSKDYASSTWCLDEMAAIADCRAELKQIVFPVFYDVDPSHVRKQNGVYESAFVLHTETFKDDPHKVDGWKRAMTCFAGSTGWDVRNKPEVEEIENIVEAVIEKLGHKFSGYADDLIGIQPQVKELETLLKLSSHDDNFRVLGIWGMDGIGKTTLATVLYDKISHHYQYGACCFIHNVSTIYRDGGAIAVQKQILHQTLKEKNLDAYSPSEISGIITKRLFNRKLLVILDDVDQIEQLQKLHIKTKLLCPGSRIIITTRDVHILELYGADRIHKVELMNDNDAHELLCRKAFKSDNSNSDYAELIPKVLKYAQGLPLAIRVMGCFLYNRNTTQWRAILKGLENNPDSGIMKVLQSSFEGLELREKEIFLHVACFFEGERDDYVRRILDACGLQPEIGISLIAEKSFIIIRNQEIHMHKMLQELGKKIVREQHPDEPRLWSRLWLYRDLHDAMITKLEAIKAKAIILNQKEDVSNFNQPKGEDLLKMENLKLLILDHSNFSGSPKFLSDSLCYLMWKGYPFKSFPSKFQPYNLVELNMPNSNIEQLWIGIQRLPKLKRMDLSNSKNLKMTPCFEMIQNLERLDLTGCINLFEVHPSIGLLTKLVFLSLQNCSSLVTLDFGNPSRLRYLKVLRLSDCTKLENTPNFGGLSNLQYLDMDRCASLSTIHELIGDLAKLKFLSLRDCTNLVEIPAQIMRFLTTLDLHGCSKLIRLSLSQISTSSLQSLLFLDLSYCNISEVPDAIGELSCLERLNLQGNDFTELPFIDDLHNLSYLNLSHCHKLQSLPELPTTIGGASDSVGRYFKTTSGSRNHRSGLYAFDTPSCTKYISIVEEQINMWILRLLKEPLYFRCGFDLVLPWYEDEEASDMRSIFCYYWFKGDSIVRINDPVMDVDWHGFLFGVTFELNNHPKQSSFSHQSLSSSLPHPFYLSFESEYTEELFDMSLNLESNQVDGLNYVWMIYISREHCHFVKTGAHITFKARQGLLIKKWGLRVITKKDTQGSMMEMSVPVHLPLENVKVKQRRRGSSNFVPKIQLPYNWFVSDEDEAERDEAKGKETDLFNLGLLSESSQ 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01670 1174 ProSiteProfiles Leucine-rich repeat profile. 852 873 IPR001611 GO:0005515
Trre14g01670 1174 FunFam Disease resistance protein (TIR-NBS-LRR class) 44 214 - -
Trre14g01670 1174 Pfam Leucine Rich Repeat 638 657 IPR011713 -
Trre14g01670 1174 ProSiteProfiles TIR domain profile. 46 212 IPR000157 GO:0007165
Trre14g01670 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 721 IPR044974 GO:0006952
Trre14g01670 1174 SUPERFAMILY L domain-like 590 891 - -
Trre14g01670 1174 Gene3D Ribonuclease Inhibitor 748 900 IPR032675 -
Trre14g01670 1174 SMART till_3 47 187 IPR000157 GO:0007165
Trre14g01670 1174 Gene3D Ribonuclease Inhibitor 580 747 IPR032675 -
Trre14g01670 1174 Gene3D - 219 377 IPR027417 -
Trre14g01670 1174 PRINTS Disease resistance protein signature 657 673 - -
Trre14g01670 1174 PRINTS Disease resistance protein signature 248 263 - -
Trre14g01670 1174 PRINTS Disease resistance protein signature 326 340 - -
Trre14g01670 1174 PRINTS Disease resistance protein signature 419 433 - -
Trre14g01670 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 477 IPR027417 -
Trre14g01670 1174 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 190 IPR035897 -
Trre14g01670 1174 SUPERFAMILY "Winged helix" DNA-binding domain 456 556 IPR036390 -
Trre14g01670 1174 Pfam TIR domain 48 216 IPR000157 GO:0007165
Trre14g01670 1174 Gene3D - 385 468 IPR042197 -
Trre14g01670 1174 Gene3D - 41 217 IPR035897 -
Trre14g01670 1174 Pfam NB-ARC domain 238 457 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01670 Trre-Chr14 14982070 14990002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01670 729 891 WRKY Transcription Factor Family AT4G12020 34.940 5.20e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01670 - - mtr:25498786 1415.98