Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01669 ATGCCAAAGCGACCCTTTCAGAGTGTGTCAAGGGAACCAGGTACACATCCTAGTTCTTCAAAGGATTCTGATACAATTCAAACCTATAGAAATATAAATAGATATAGATATGATGTGTTTATCAGTTTTAGAGGCGTTGACACACGCAACACCTTCGTTGATCATCTCTACGCTCATCTAGTTAGAAAAGGAATTTTCGTTTTCAAAGATGACACACAGCTTCGTAAAGGAAAATCCATTTCACCTCAACTTCTACAGGCAATTAAAGATTCTCGGGTTTTCATTATTGTCTTCTCAAAAGATTATGCTGCCTCTACTTGGTGTTTGGATGAAATGGCTGCTATTGCTGATAGCCATAGGGATATGAATCAAATCGTTTTCCCCGTTTTTTATGATGTCGATCCATCTCACGTCCGTAAACAGAATGGAATGTATTGGAATGACTTAGTTTTACATTCCGACCGATTCAAACATGATCCAAAAAGAGTAAATGGGTGGAAGAAAGCTATGACCTATTTCGCTGGAATTGCAAGTTGGGATGTTAGGAATAAGCCAGAGTCTGAAGAGATTGAAAAAATTGTCCAGTGTGTAATAAAAGCATTGGGTCATAAATTCTCAGGATTTGCTAATGACCTTATTGGAATACAACCTCGTGTAGAAGCATTAGAAAGACTTTTAAATTTAAAGTCAGAGGAGGATGGTTTTCGAGTTTTAGGAATATGGGGGACGGGTGGCATAGGGAAGACAACTCTTGCAACTGTCTTGTATGACACAATCTCACACCACTATCAATTTGGTGCTTGTTGTTTTATCGAGAATGTTAGCACAATTTATAGAGATGGTGGTGCTATTGCCGTGCAGAAACAAATTCTTCATCAAACTCTGAAAGAACAAAATCTTGAGGCACACAGTCCTTCTGAAATTTCTGGAATTATAATAAATAGGCTATACAACATGAAGCTCCTTGTAGTTCTTGATGATGTTGATCAATTTGAGCAACTACAAGAATTGCACATAAATCCCAAATTGCTTCGTCCAGGAAGTAGAATAATCATAACCACTAGAGATATGAATATTCTTGAATTGTATGGGGCAGATAAAATTTATGAGGCTGAATTAATGAATGATAACGACGCTCATGATCTATTGTGTAGAAAAGCCTTCAAAAGTGATTATTCAAAAAACACTTTTGCAGAACTAATCCTTGAGGTTCTGAAATATGCTCAAGGTCTTCCACTAGCAATTACAGTAATGGGTTCTTTCCTTTGTAACCGAAATATCATGCAGTGGAGAGCTACCTTTGATGGATTGCAAAATAATCCAGACAAAAGAATTATGAAAGTGCTTCGTATGAGTTTTGAGGGACTACAACCAAGAGAGAAAGAAATATTTTTGCACGTTGCTTGTTTCTTTGAAGGGGAAAGGGAGGATTATGTAAGGAGAATCCTACATGCTTGTGGATTGCAACCTAACATTGGAATTCCACTCATCGCTGAAAAATCACTCATAACCATTAGAAACCAGGTAATTTGTATGCATAAAATGTTGCAAGAGTTGGGGAAACAAATTGTTCAAGGACAACATCTCGACGAGCCTAGATTTTGGAGTAGATTATGGCTTTATCGAGATTTTCGTCATGTGGTGATGACCAAAACGGAAGCAATAGATACTAAAGCTATAGTTCTAGATCAAAAGGAGGATGGTTTAAAATTCAATAAGTTACAGGCTGAAGATTTATCAAAAATGGTGCACCTGAAACTACTCATTTTAAATCAAAAGAATTTTTCTGGAAAACCGATATTTTTTTCAAATTTCCTATACTATTTTTCATGGAATGGTTACCCTTTCACCGCTTTACCATCAAATTTTCAGCCATATGACCTTGTTGAATTGAATATGCCTGACAGCAACATCGAACAACTATGGGAAGGCATCCAGTGTCTACCCTGTTTGAAAAGGATGGATCTGAGCAACTCTAAAAATCTGAAGATGACTCCATGTTTTGAGGGAATCCTAAACCTGGAGCGGCTAGATTTTACAGGATGCATAAATTTGTTGCAGGTGCATCCATCAATTGGGCTTCTTTCCGAACTTGTATTCTTAAGTTTGCAGAAATGTAGTAGTCTAGTCCACCTTGATTTTGGCAGTGCATCAAGGTTATGGTCTTTGAGAATTTTACGTCTCTCTGGTTGCACTAAACTTAAAAGAGCTCCAGATTTAACCGGAGCATTAAATCTTGAGTACCTCGATGTTGACCAATGCACAAGTTTATCCTCATTTCGTGGATCTCTTATAAAGCTTAGAGTCTTAAGTTTGAGAGACTGCACAAATCTTGTTAGACTATCTGATAGCCTTGATAAAATGACATCTCTTATAACTTTGGATCTATGCGGCTGCTTGAAATATAAGTGTCTGCCTATCGATTCTGTTATGGAATCTTTGATTTTTCTCGACTTAAGCTTTTGCAATATTTCTGTAGTACCTGATGCTATTAGAGAATTAAGGGGTTTAGAGAGACTAAATTTACAGGGAAATAACTTCACTGTACTTCCTTCCAGCTTGAGTTGTCTTCACAATCTATCATATTTAAACTTGTCACATTGTCATAGGCTTGAAAATTTGCCTTCGATCCCAACAAACAGTGGTCCATCAGATTCAGCGGGAAGATATTTTAAAACAACATCTGGATCTCGTGATCATAGATCTGGATTATATGTTTTTGACAGTCTTAAAATGGATGCATCCTTGTCTAGGGTGAGATCCCCTGTAAACCTTCAATATAAATGGCTAAAAAGACTACTTAAGGAACCTCGTCATTTTCGGTGTGGCTTTGACATTGTTCTTCCTTCTTATCGTCACTCAGATATTACAAAGTGGTTTGAATACCGATATATAGGGGGTTCAATAATAAGGATAAAGAACTTTCATATGCATGTCGATTGGGTTGGTTTTGTCTTTTCTGTACAATTTGAGGTAAGATACCCAATGCCAAATTGTGCAAGTTCTCATCAACCTTTTCCACTGCCATATCCTTTCTATCTTTCTTTTGAAAGTGAATACACAGAAGAACGATTTGATATGCCACTTAATTTGGAACTAAATATGATTGATGGCGAACATTATATTTGGACAATCTATATCTCTCGGGAACACTGCCATTTTGTGAAAACTGGAGCACAAATTACATTTAAAGCCCACCAGGGATTTCTTATTAATGAGTGGGGGTTGCGCATGCTAACCATGAGAGACATGGATGAGTCAGGCATGCATAGTATGATGCGTCCCCAGGGCCTCTCGACCAGGTTAAGGTGGGAAGACGCGGTGACTAGAGGAACAGAATTGCAGATTGAGAAGGTAGGAGAAAGCAGCAACAGAAGCAGCAACAACAACAACAACAACAACATTGGGCCCAAAATCCAGCTTCCTTACAATTGGCTAGTATCTAGCGAAGATGATGTTGAGAATGATGAAGCTAAGGGGAAAGAAATTAATCTCTTTAATCTAGGCCTTTAG 3513 0.3772 MPKRPFQSVSREPGTHPSSSKDSDTIQTYRNINRYRYDVFISFRGVDTRNTFVDHLYAHLVRKGIFVFKDDTQLRKGKSISPQLLQAIKDSRVFIIVFSKDYAASTWCLDEMAAIADSHRDMNQIVFPVFYDVDPSHVRKQNGMYWNDLVLHSDRFKHDPKRVNGWKKAMTYFAGIASWDVRNKPESEEIEKIVQCVIKALGHKFSGFANDLIGIQPRVEALERLLNLKSEEDGFRVLGIWGTGGIGKTTLATVLYDTISHHYQFGACCFIENVSTIYRDGGAIAVQKQILHQTLKEQNLEAHSPSEISGIIINRLYNMKLLVVLDDVDQFEQLQELHINPKLLRPGSRIIITTRDMNILELYGADKIYEAELMNDNDAHDLLCRKAFKSDYSKNTFAELILEVLKYAQGLPLAITVMGSFLCNRNIMQWRATFDGLQNNPDKRIMKVLRMSFEGLQPREKEIFLHVACFFEGEREDYVRRILHACGLQPNIGIPLIAEKSLITIRNQVICMHKMLQELGKQIVQGQHLDEPRFWSRLWLYRDFRHVVMTKTEAIDTKAIVLDQKEDGLKFNKLQAEDLSKMVHLKLLILNQKNFSGKPIFFSNFLYYFSWNGYPFTALPSNFQPYDLVELNMPDSNIEQLWEGIQCLPCLKRMDLSNSKNLKMTPCFEGILNLERLDFTGCINLLQVHPSIGLLSELVFLSLQKCSSLVHLDFGSASRLWSLRILRLSGCTKLKRAPDLTGALNLEYLDVDQCTSLSSFRGSLIKLRVLSLRDCTNLVRLSDSLDKMTSLITLDLCGCLKYKCLPIDSVMESLIFLDLSFCNISVVPDAIRELRGLERLNLQGNNFTVLPSSLSCLHNLSYLNLSHCHRLENLPSIPTNSGPSDSAGRYFKTTSGSRDHRSGLYVFDSLKMDASLSRVRSPVNLQYKWLKRLLKEPRHFRCGFDIVLPSYRHSDITKWFEYRYIGGSIIRIKNFHMHVDWVGFVFSVQFEVRYPMPNCASSHQPFPLPYPFYLSFESEYTEERFDMPLNLELNMIDGEHYIWTIYISREHCHFVKTGAQITFKAHQGFLINEWGLRMLTMRDMDESGMHSMMRPQGLSTRLRWEDAVTRGTELQIEKVGESSNRSSNNNNNNNIGPKIQLPYNWLVSSEDDVENDEAKGKEINLFNLGL 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01669 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 466 IPR027417 -
Trre14g01669 1170 Gene3D - 374 457 IPR042197 -
Trre14g01669 1170 SUPERFAMILY L domain-like 579 876 - -
Trre14g01669 1170 Gene3D - 208 366 IPR027417 -
Trre14g01669 1170 PRINTS Disease resistance protein signature 237 252 - -
Trre14g01669 1170 PRINTS Disease resistance protein signature 315 329 - -
Trre14g01669 1170 PRINTS Disease resistance protein signature 646 662 - -
Trre14g01669 1170 PRINTS Disease resistance protein signature 408 422 - -
Trre14g01669 1170 Pfam Leucine rich repeat 817 869 IPR001611 GO:0005515
Trre14g01669 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 178 IPR035897 -
Trre14g01669 1170 Gene3D - 34 207 IPR035897 -
Trre14g01669 1170 SUPERFAMILY "Winged helix" DNA-binding domain 444 547 IPR036390 -
Trre14g01669 1170 Pfam Leucine Rich Repeat 627 646 IPR011713 -
Trre14g01669 1170 FunFam Disease resistance protein (TIR-NBS-LRR class) 33 203 - -
Trre14g01669 1170 MobiDBLite consensus disorder prediction 11 25 - -
Trre14g01669 1170 Pfam TIR domain 37 204 IPR000157 GO:0007165
Trre14g01669 1170 Pfam NB-ARC domain 222 443 IPR002182 GO:0043531
Trre14g01669 1170 SMART till_3 36 176 IPR000157 GO:0007165
Trre14g01669 1170 Gene3D Ribonuclease Inhibitor 742 808 IPR032675 -
Trre14g01669 1170 Gene3D Ribonuclease Inhibitor 809 930 IPR032675 -
Trre14g01669 1170 Gene3D Ribonuclease Inhibitor 561 741 IPR032675 -
Trre14g01669 1170 ProSiteProfiles TIR domain profile. 35 201 IPR000157 GO:0007165
Trre14g01669 1170 MobiDBLite consensus disorder prediction 1 25 - -
Trre14g01669 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 738 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01669 Trre-Chr14 14965393 14971158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01669 718 875 WRKY Transcription Factor Family AT4G12020 34.568 2.97e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01669 - - mtr:25498786 1308.12