Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01666 ATGTCTGCCTCTTGCACATCATCCGATCGTAATCTATTGGATTCAGGAGATACAAGGTCAAGTTCTTCCCAGCTTTCTGATATCAATAGCATCCAAAGCTATAGATATAGATATGATGTATTTATCAGTTTCAGAGGTCCAGACGCTCGCAATACCTTTGTTGACCATCTCTATGCTCATCTAGTTAGAAAAGGTCTTATGGTTTTCAAAGATGACATGGAACTTCGCAGAGGAGAATCTATTTCACCCCAACTTTTGCAAGCAATTAAAGATTCACGGCAAATTGTTTTTCCTGTTTTTTATGATGTCGATCCATCCCATGTCCGAAAACAAAATGGAGTGTATGAAACTGCCTTTGTTTTACACACTGAGACATTCAAAGATGATCTACACAAGGTTGATGGGTGGAAGAGAGCTATGAGCCGCTTGGCTGGATTGGCTGGTTGCGATGTCCGGAATAAGCCAGAGTTTGAAGAGATTAAAAAAATTGTCCAGGATGTAATAAAAGTGTTGGGTCGTAGATTCTCAAGTTTTGCCGACGATCTCATCGGAACACAACTCCACGTTGAAGCTTTAAAAAGTCAGTTAAGATTAAGCTCAAAGGATGATGGTTTACGAGTTTTGGGAATATTGGGTATGGGTGGCATAGGAAAGACAACTCTGGCAACTGTCTTGTATGACACAATATCACATCACTATCAATTTGATGGTTGTTGTTTTATCGAGAATGTTAGCAAAATTTATAAAGACGGTGGTGCTATTGCTGTGCAGAAAAAAATTATTCGTCAAACTCTGAAAGAAAAAAATTTGGATGTATGCGATCATTCTGAAATATCTGGAATTATAACACATAGGCTGTATAACATGAAGCTCCTTATAGTTCTTGATGATGTTGATCTCATTGAGCAACTACAAGAATTGCGTATGGATCCCAAATTGCTCTGTCGAGGAAGTAGAATAATCATAACCACTAGAGATGTGCATATTCTTAAAGAGTATGGAGCTGATAAAATTCATGAGGTAGAACTGATGAAAGATAGCGATGCTCATGATCTTCTCTGTAGAAAAGCTTTCAAATATGATTACTCAAGCAGCAGTTTTGCAGAGTTAATTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCGTTAGCAATTACAGCAATAGGTTCTTTCTTGTGTACCCGAAGTTACATGGAGTGGAGAGCTAAGTTAGATGAATTGCGAGATAATCCGGACACAAGAATTATGAAAGTGCTTCAGATGAGTTTTGAAGGATTAAATCCAACAGAAAGAGAGATATTTTTGCACGTGGCTTGCTTCTTTGATGGGGAGAAGGAGGATTACGTAAGGCGAATCCTAGATGCTTGTGATTTGCATCCTAATATTGGAATAACCATCATTGCTGAAAAATCACTCATAACCATTAAAAATCAGGAAATTCATATGCATAAAATGTTGATAGAGTTGGGAAAGAAAAATATTCGGGATCAATATCCTGATGAGCCAAGATTATGGAGTAGATTGTGGCTTTACCGTGATCTCCTCAATGCGATGATTTCAAAACAGGATGCAATAAAAGCTAAAGCCATAATTCTAAATCAAAGAGAGGATGTTAGCAAATTCAAAAGGTTGATGGATGAAGAAGATTTATCAAAAACGATTCCTGGTGATTCAGAATTTAATCATGACAAGGCACATCTCTGGGATACCAAAAAAGATTTTCCTTTGGCTGTTCCAAAAAGAAAAAATACCGAAAAAGATTTGGAGAACTTGAAAGTGCTCATATTATCATCTTCAAAGTTTTCAGGAAGCTATGGATTCCTTTCCAATTCCCTACGCTATCTTTTATGGAATGGTTGCCCTTTGACGTATTTGCCATCAAATTTTCAACCATATAACCTTGTAGAATTGAATATGCCTGATAGTAGGATTGGAAAACTATGGGAAGGCGTCCAGCATCTCCCCAAATTGGAAAGGATAGATCTCAGTAACTCCAAAAATCTGAAGGTGACTCCATGCTTTAAAGGGATGGAAAAACTTGAGCGGCTAGATCTTACAGGATGCATAAACTTGTTGGAGGTGCATCCATCAATTGGACTTCTTACAGAACTTGTATTCTTGACTTTGCAGAACTGTGCTAGTCTAGTCACCCTTGATTTTGGCAATGCACCAAGACTAAGGTCTTTGAGAGTTCTTCGTCTTGCTGGTTGTACAAAACTTGAAAACACTCCAGATTTCTGTGGAACATTAATTCTTCAGTACCTTGATATGGATCGATGCACAAGTTTATCCACGATTCATGAATCTGTTGGGGCTCTTGCAAACCTTAAATTCTTAAGTTTGAGAGACTGCACAAATCTTGCTGAAATGTTTATCAACATTAATTTAATGACATCTCTTACAACTCTAGATCTTCATGGATGCTCTAAATTAATTGGGTTGTCATCGAGTCAGATTTCCACTTCTTCTCTGCAATCTTTGATTTTTCTAGACTTAAGTTTTTGCAATATTGCTGAAGTACCTAATGCTATTGGAGAATTCAAGTGTTTAGAAAGACTAAATCTTCAGGGAAATAACTTCACCGAACTACCCTCCAGTTTCGGTAGACTTCACAATCTATCATATTTAAACTTGTCACATTGTCATAAGCTTCAAAGTTTGCCTTATCTTCCAAAACACAGTGGTCCATCAAATTCAGTCGGAAGATACTATAAAACAACATCTGGATCCCGTAATAATACTTCAGGACTATATGTGTTTGACTCTCTCAAATCGTCGTCCCACCGTTGCATCACTGATTGGATACTAAGATTACTGAAGCAACCTCTTCACTTTCGGTGTGGCTTTGACATTGTTCTTCCTTGTTATTCTGATCTAAATTGTCTCATTCCAAAGATTTTCCAGTGCCAGTTTAAAGGGAGTTCAATAGTAAGGATAAATGACCCTGTTATGGACGTTGATTGGGTTGGCTTTCTCTTTTATGTAAAATTTGAGTTAAGAAATCATCATGTACTATCTAGTTCTTCACACCAATCGCTCTCTTCGTCACTGTCACATCCTTTTTATCTTTCTTTTGAGAGTGAATACACAGAAGAACGCTTTGATATGCCACTTAATTTGGATTCAAACAAGGTTGATGGCTCAAAGTATGTTTGGATGATCTATATATCTCGGGAACACTGCCATTTTGTGAAAACAGGAGCACACATCACATTTAAAGCCCGCCAAGGTTTGATTATCAAGGAATGGGGGTTGCGTGCCATAACCAAGAAAGACACACGGTGCTCAACGATGGAAATGAGTGTACCAGTACATCTTCCTTTAGAGAAAAGAAGCGACAGCAGTAGCTTTGAGCCCAAAATCCAACTTCCTTACAATTGGTTTGTTTCTGACAAAGATGAAGCTGAGAGGGATGAAGCCAAGGGAAAAGAAACTCATCTCTTTAATCTTGGCCTTTTAACTCAAAGTTCACAATGA 3477 0.3785 MSASCTSSDRNLLDSGDTRSSSSQLSDINSIQSYRYRYDVFISFRGPDARNTFVDHLYAHLVRKGLMVFKDDMELRRGESISPQLLQAIKDSRQIVFPVFYDVDPSHVRKQNGVYETAFVLHTETFKDDLHKVDGWKRAMSRLAGLAGCDVRNKPEFEEIKKIVQDVIKVLGRRFSSFADDLIGTQLHVEALKSQLRLSSKDDGLRVLGILGMGGIGKTTLATVLYDTISHHYQFDGCCFIENVSKIYKDGGAIAVQKKIIRQTLKEKNLDVCDHSEISGIITHRLYNMKLLIVLDDVDLIEQLQELRMDPKLLCRGSRIIITTRDVHILKEYGADKIHEVELMKDSDAHDLLCRKAFKYDYSSSSFAELIPEVLKYAQGLPLAITAIGSFLCTRSYMEWRAKLDELRDNPDTRIMKVLQMSFEGLNPTEREIFLHVACFFDGEKEDYVRRILDACDLHPNIGITIIAEKSLITIKNQEIHMHKMLIELGKKNIRDQYPDEPRLWSRLWLYRDLLNAMISKQDAIKAKAIILNQREDVSKFKRLMDEEDLSKTIPGDSEFNHDKAHLWDTKKDFPLAVPKRKNTEKDLENLKVLILSSSKFSGSYGFLSNSLRYLLWNGCPLTYLPSNFQPYNLVELNMPDSRIGKLWEGVQHLPKLERIDLSNSKNLKVTPCFKGMEKLERLDLTGCINLLEVHPSIGLLTELVFLTLQNCASLVTLDFGNAPRLRSLRVLRLAGCTKLENTPDFCGTLILQYLDMDRCTSLSTIHESVGALANLKFLSLRDCTNLAEMFININLMTSLTTLDLHGCSKLIGLSSSQISTSSLQSLIFLDLSFCNIAEVPNAIGEFKCLERLNLQGNNFTELPSSFGRLHNLSYLNLSHCHKLQSLPYLPKHSGPSNSVGRYYKTTSGSRNNTSGLYVFDSLKSSSHRCITDWILRLLKQPLHFRCGFDIVLPCYSDLNCLIPKIFQCQFKGSSIVRINDPVMDVDWVGFLFYVKFELRNHHVLSSSSHQSLSSSLSHPFYLSFESEYTEERFDMPLNLDSNKVDGSKYVWMIYISREHCHFVKTGAHITFKARQGLIIKEWGLRAITKKDTRCSTMEMSVPVHLPLEKRSDSSSFEPKIQLPYNWFVSDKDEAERDEAKGKETHLFNLGLLTQSSQ 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01666 1158 SUPERFAMILY "Winged helix" DNA-binding domain 414 515 IPR036390 -
Trre14g01666 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 746 IPR044974 GO:0006952
Trre14g01666 1158 Pfam NB-ARC domain 188 412 IPR002182 GO:0043531
Trre14g01666 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 148 IPR035897 -
Trre14g01666 1158 Pfam Leucine Rich Repeat 633 652 IPR011713 -
Trre14g01666 1158 Pfam TIR domain 38 97 IPR000157 GO:0007165
Trre14g01666 1158 SUPERFAMILY L domain-like 586 889 - -
Trre14g01666 1158 Gene3D - 35 93 IPR035897 -
Trre14g01666 1158 MobiDBLite consensus disorder prediction 1 24 - -
Trre14g01666 1158 Gene3D Ribonuclease Inhibitor 752 900 IPR032675 -
Trre14g01666 1158 Gene3D - 176 338 IPR027417 -
Trre14g01666 1158 PRINTS Disease resistance protein signature 378 392 - -
Trre14g01666 1158 PRINTS Disease resistance protein signature 285 299 - -
Trre14g01666 1158 PRINTS Disease resistance protein signature 652 668 - -
Trre14g01666 1158 PRINTS Disease resistance protein signature 207 222 - -
Trre14g01666 1158 Gene3D - 344 427 IPR042197 -
Trre14g01666 1158 ProSiteProfiles TIR domain profile. 36 171 IPR000157 GO:0007165
Trre14g01666 1158 Gene3D Ribonuclease Inhibitor 581 751 IPR032675 -
Trre14g01666 1158 SMART till_3 37 146 IPR000157 GO:0007165
Trre14g01666 1158 Gene3D - 94 175 IPR035897 -
Trre14g01666 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01666 Trre-Chr14 14956238 14964178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01666 772 888 WRKY Transcription Factor Family AT4G12020 30.216 9.07e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01666 - - mtr:25498786 1267.29