Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01662 ATGCCTAAGCGACCCTTTGGGAGTATGTCAATGGAAGGAGATACACATCCTAGTTCTTCAAAGGATTCTGATACAATTCAAACCTATAGAAATATAAATAGATATAGATATGATGTGTTTATCAGTTTTAGAGGCGTTGACACACGCAACACCTTCGTTGATCATCTCTACGCTCATCTCATTAGAAAAGGTATTTTTGTTTTCAAAGATGACAAACAGCTTCAGAAAGGTGAATCCATTTCACCCCAACTTCTACAGGCAATTAAAGATTCTCGGGTTTTCATTATTGTATTCTCAAAAAATTATGCTTCCTCAACTTGGTGTATGGATGAAATGACTGCTATTGCTGAATGCCTTACAAAACAAACTGTTTTCCCTGTTTTTTATGATGTTGATCCATCTCTTGTCCGAAAACAGAATGGACAGTATCGGATTGCCTTATGTTTACACGCCAACCGACTCAAATGTGATCCAGAAAAGGTTGATGGGTGGAAGAGAGCTATGACCTATTTCGCTGGAATCGCTGGTTGGGATGTCAGGAATAAGCCAGAGTTTGAAGAGATCGAAAAACTTGTCCAGGCTGTAATAAAAGCATTGGGTCATAAATTCTCAGGATTTGCTAATGACCTTATTGGAATCCAACCTCGTGTAGAAGCATTAGAAAGACTTTTAAATTTAAAGTCAGAGGAAGATGGCTTTCGAGTTTTAGGAATATGGGGGATGGGTGGCATAGGGAAGACAACTCTTGCAACTGTCTTGTATGACACAATCTCACATCACTATCAATTTGGTGCATGTTGTTTTATCGATAATGTTAGCACTATTTATAGAGATGGCGGTGCTATTGCCGTGCAGAAACAAATTCTTCATCAAACTTTGAAAGAACAAAATCTGGATGCACACAGTCCTTCTGAAATTTCTGGAATTATAGTAAATAGGCTATACAACATGAAGCTCCTTGTAGTTCTTGACGATGTTGATCAATTTGAGCAACTACAAGAATTGCACATAAATCCCAAATTGCTCTGTCCAGGAAGTAGAATAATCATAACCACTAGAGATGTGCATATTCTTGAATTGTATGGAGCGGATATAATTCACGAGGTTGAATTGTTGAATGATAACGACGCTCATGATCTTTTGTGTAGAAAAGCCTTCAAAAGTGATTATTCAAGAAACACTTTTGCAGAACTAATCCCTGAGGTACTTAAATATGCTCAAGGTCTTCCAATAGCAATTACAGTATTGGGTTCTTTCCTTTGTAACCGAGATATCTTGCAGTGGAGAGCTACATTGGATGGATTAAAAAATAATCCAGACAAAAGAATTATGAAAGTGCTTCATATGAGTTTTGAGGGACTACAACCAAGAGAGAGAGAAATATTTTTGCACGTCGCTTGTTTCTTTGAAGGTGAAAGGAAGGATTATGTAAGGCGAATTCTACATGCTTGTGGATTGCAACCTGATATTGGAATTCCCCTCATCGCCGAAAAATCACTCATAACCATTAGAAACCAGATGATTTGTATGCATAAAATGTTGCAAGAGTTGGGAAAGCAAATTGTTCAAGGACAACATCTCGACGAGCCTAGATTCTGGAGTAGATTATGGCTTTATCGGGATTTTCATCATGTGATGATGACCAGAACGGAAGCAATAGAAACTAAAGCCATAGTTTTAGATCAAAAGGAGGATGGTTTCAAATTCAATAAGTTACAGGTTGAAGGTTTATCAAAAATGGAGCACCTGAAACTACTCATATTAAATCACAAGGATTTTTCACGAAAACCCACTTCTCTTTCAAATTTCCTATACTATTTTTCATGGAATGGTTATCCTTTCAGCACTTTACCATCAAATTTTCAGCCATACGACCTTGTTGAATTGAATATGCCAGGCAGCAACATCGAACAATTATGGGAAGGCATCCAGTGTCTACCCTGTTTGAAAAGGATGGATCTGAGCAACTCCAAAAATCTGAAGATGACTCCATGTTTTGATGGAATCCTAAACCTGGAGCGGCTAGATCTTACAGGATGCATAAACTTGCTGCAGGTGCATCCATCAATTGGACTTCTTTCTGAACTTGTATTCTTGAGTTTGCAGAAATGTAGTAGTCTAGTCCACCTTGATTTTGGCAGTCCATTAAGATTATGGTCGCTGAGAGTCTTACGTCTCTCTGGTTGCACAAAACTGAAAAGCACTCCAGATTTCACTGGAGCACTAAATCTTGAGTACCTTGATGTCGATCAATGCAGAAGTTTATCCACATTTCATGGTTCTCTTCCAAAGCTTAGAGTCTTAAGTTTGAGAGACTGCACAAAGCTTGTTAGACTATCTGATAGCCTTGATAAAATGACATCTCTGATAACTTTGGATCTATACAGCTGCACGAAACATCAATATATGCCTGTCAATTCTGCTATGGGATCTTTGATTTTTCTCGACTTAAGCTTTTGCAATATTTCTATAGTACCCGATGCTATTGGAGAATTAAGGGGTTTAGAGAGACTAAATTTACAGGGGAATAACTTTATTAGACTACCTTCTACCATCCAAAGACTTTACAGTCTAGCATATTTAAACTTGTCACATTGTCATAAGCTTCAACATTTGCCTTCGGCTCCAACAAAAAGTGGTCCATCAGATTCAGTGGGAAGATATTTTAAAACAACATCTGGGTCTCGTGATCATAGATCAGGATTATATGTTTTTGATTGTCTTAAAATGGATGGGTCCATGTGGAGATCCTCTAGAGACCATCAATATGAATGGCTACAAAGACTATTTAAGGAATCTCGCCATTTTCGGTGTGGCTTTGACATTGTTCTACCTTTTCCTTGTTGTGGTTCTGTATATATTCCAATGTGGTTCGATCACCGATATAAGGGGGGTACAATTATAAGGATAAAGAACTTTGGTATGCACGCAGAATGGCTTGGATTTGTCTTTTTTGTACAATTTGAGGTAAGATACCCAATGCGAAATTCTGCAAGTTCTCAACAACCTTTTCCATTGCCATATCCTTTCTATCTTTCTTTTGAAAGTGAACACACAGAAGAGCGATTTGATATGCCACTTAATTTGGAATCAAACAAGGTTGATGGCTCAAAGTATGTTTGGACAATCTATATCTCTCGGGAACACTGCCATTTTGTGAAAACAGGAGCACAAATAACATTTAAAGCCCACCAAGGTTTGATTATGAACGAGTGGGGCTTCCACGTGCTAACCGAGAAAGACATAAAAGGGTCAAACATGTCTGATTTATGGTGCTCGGCCAAGCTAAACTGGGAAGACATGGTGACAAGAGGAACACGACTACAGGTTGAGAGAGTAGAAGAAAGCAGCAACAACAACAGCAACAGCAACATTACTCCCAAAATCCAGCTTCCTTACAATTGGTTAGTGTCTACTGAAGATGATGTTGAGAATGATGAAGCTAAGGGGAAAGAAATTAATCTCTTTAATCTAGGCCTTTAG 3483 0.3824 MPKRPFGSMSMEGDTHPSSSKDSDTIQTYRNINRYRYDVFISFRGVDTRNTFVDHLYAHLIRKGIFVFKDDKQLQKGESISPQLLQAIKDSRVFIIVFSKNYASSTWCMDEMTAIAECLTKQTVFPVFYDVDPSLVRKQNGQYRIALCLHANRLKCDPEKVDGWKRAMTYFAGIAGWDVRNKPEFEEIEKLVQAVIKALGHKFSGFANDLIGIQPRVEALERLLNLKSEEDGFRVLGIWGMGGIGKTTLATVLYDTISHHYQFGACCFIDNVSTIYRDGGAIAVQKQILHQTLKEQNLDAHSPSEISGIIVNRLYNMKLLVVLDDVDQFEQLQELHINPKLLCPGSRIIITTRDVHILELYGADIIHEVELLNDNDAHDLLCRKAFKSDYSRNTFAELIPEVLKYAQGLPIAITVLGSFLCNRDILQWRATLDGLKNNPDKRIMKVLHMSFEGLQPREREIFLHVACFFEGERKDYVRRILHACGLQPDIGIPLIAEKSLITIRNQMICMHKMLQELGKQIVQGQHLDEPRFWSRLWLYRDFHHVMMTRTEAIETKAIVLDQKEDGFKFNKLQVEGLSKMEHLKLLILNHKDFSRKPTSLSNFLYYFSWNGYPFSTLPSNFQPYDLVELNMPGSNIEQLWEGIQCLPCLKRMDLSNSKNLKMTPCFDGILNLERLDLTGCINLLQVHPSIGLLSELVFLSLQKCSSLVHLDFGSPLRLWSLRVLRLSGCTKLKSTPDFTGALNLEYLDVDQCRSLSTFHGSLPKLRVLSLRDCTKLVRLSDSLDKMTSLITLDLYSCTKHQYMPVNSAMGSLIFLDLSFCNISIVPDAIGELRGLERLNLQGNNFIRLPSTIQRLYSLAYLNLSHCHKLQHLPSAPTKSGPSDSVGRYFKTTSGSRDHRSGLYVFDCLKMDGSMWRSSRDHQYEWLQRLFKESRHFRCGFDIVLPFPCCGSVYIPMWFDHRYKGGTIIRIKNFGMHAEWLGFVFFVQFEVRYPMRNSASSQQPFPLPYPFYLSFESEHTEERFDMPLNLESNKVDGSKYVWTIYISREHCHFVKTGAQITFKAHQGLIMNEWGFHVLTEKDIKGSNMSDLWCSAKLNWEDMVTRGTRLQVERVEESSNNNSNSNITPKIQLPYNWLVSTEDDVENDEAKGKEINLFNLGL 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01662 1160 Gene3D Ribonuclease Inhibitor 560 743 IPR032675 -
Trre14g01662 1160 Pfam Leucine Rich Repeat 625 644 IPR011713 -
Trre14g01662 1160 Pfam TIR domain 37 201 IPR000157 GO:0007165
Trre14g01662 1160 Gene3D Ribonuclease Inhibitor 752 879 IPR032675 -
Trre14g01662 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 464 IPR027417 -
Trre14g01662 1160 Gene3D - 34 205 IPR035897 -
Trre14g01662 1160 SUPERFAMILY L domain-like 574 873 - -
Trre14g01662 1160 MobiDBLite consensus disorder prediction 1 24 - -
Trre14g01662 1160 SUPERFAMILY "Winged helix" DNA-binding domain 442 545 IPR036390 -
Trre14g01662 1160 PRINTS Disease resistance protein signature 760 776 - -
Trre14g01662 1160 PRINTS Disease resistance protein signature 235 250 - -
Trre14g01662 1160 PRINTS Disease resistance protein signature 313 327 - -
Trre14g01662 1160 PRINTS Disease resistance protein signature 406 420 - -
Trre14g01662 1160 SMART till_3 36 174 IPR000157 GO:0007165
Trre14g01662 1160 ProSiteProfiles TIR domain profile. 35 199 IPR000157 GO:0007165
Trre14g01662 1160 FunFam Disease resistance protein (TIR-NBS-LRR class) 33 201 - -
Trre14g01662 1160 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 177 IPR035897 -
Trre14g01662 1160 Gene3D - 206 364 IPR027417 -
Trre14g01662 1160 Pfam NB-ARC domain 220 441 IPR002182 GO:0043531
Trre14g01662 1160 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 707 IPR044974 GO:0006952
Trre14g01662 1160 Gene3D - 371 455 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01662 Trre-Chr14 14923975 14928704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01662 718 875 WRKY Transcription Factor Family AT4G12020 32.099 9.43e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01662 - - mtr:25498786 1313.52