Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01661 ATGACACTCTTGGCTAATTTATCCGGTCGGCATATCATGAATAAGCCGGAATCTGAAGAGATTGAAAATATTGTCCAGGCTGTAATAGAAAAATTGGGTCGTAAATTCTCAGGATCTTCTGATGACCTTATAGGAATACAACCTCGTGTAGCAGCATTAGAAAGACTTTTAAATTTAAAGTCAGAGGAGGATGGTTTTCGAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGAAAACTATTGCTAGTGTCTTATTGTGGCTTTACGAGGATTTTCATCTTGCATTGATGACAGAAACGAGAACAACAGAAGTCAGGGCCATAGTACTAGATCAAAGGGAGGATGACTTCGGGTTCAAACAGTTGAAGGCTTCCGATTTATCAAAATTGGGGTTCGTGGAAATGCTAATATTGCGTCATAAGAATTTTTTAGGAAGGCTCCACTCTCTTCCCAATACTCTTCGTTGTTTATCATGGATTGGTTACCCTTTCACTTATTTGCCATCAAATTTTCAGCCACATAAGCTTGTTGATGTGAATCTGTCTGATAGCAGCCTTGAACAACTATGGACAGGCATCCAGTATTTACCCCATTTGAAAAGGATGGATTTGAGCAACTCCAAAAATCTCAGGATGACTCCAAGATTTGATGGGATGCAAAATCTTGAGCGGCTAGATTTCACAGGATGCACAAACTTGTCGGAGGTGCATCCATCAATTGGACTTCTCGAAAAACTTGTATTCTTGAGTTTGCAGAACTGTAAGAGCCTGGTTAGCCTCAATTTTGACAGTGAATCAAGATTAAGTTCTCTAAAAGTTCTGCGGCTATTTGGTTGCACAAAACTTGAAAACCCTCTAGATTTCACAGGAGCATTAATTCTTGAGTACATTGATATGGATCAATGTAAAGGTTTAGCCACGATTCATGAATCTATTGGGACTCTTGCAAAGCTTAGATTTTTAAGTTTGAGAGAGTGCACAAATCTTGTCACAATTCCTGACTGTCTTAATGGTATGACATCTCTTGTAACTCTTGACCTACGCGGCTGCTTGAATTTTACAAATATGCCTGTCGATTCTCCTCCGATATCTTTGATTTATCTGGACTTAAGCTTTTGCAATATTTCTGAAGTACCTGATGCTATTGGAGAGTTAAGATTTCTAGAAAGGCTAAATCTTCAAGGAAATAACTTCATCACAATTCCTTCTACCATCAAAGGTCTTTCCAATCTATCATATTTAAACTTGTCTCATTGTCATAGGCTTCGTGATTTACCTGATCTCAAGCCAGAAGCTGGTCCATCAAATTCAGTAGGAGAATACTTTAAAACAACATCTGGATCACGTGACCATAGGTCTGGATTATATTTTTTTGACTGTTCCAACATGGCTAGTTTCTCCATTCAGAGTTTTGTTGTATATATCCAACTTACATGGATAGTAAGGCTAGTTCAGGAACCTCGTCTGTATCGATGTGGCTTTGACTTTGTTCTTCCTTGGCAAGGGAAGGATATTCATATTGATCTACAAAACCATAATATTCCCAAATGGTTTGGTCATCAATTTGAGGGAGGTTCAATAATCGCGATAAACCGGTCTAAGATGCCTTTAGACTGGGTTGGCTTTGTCTTCTGTGTAGAATTTGAGGTGAACAATCCATCATCTGCAGCATCTAGTTCTTCTCCACATAAATCTCTCTCCTCACAGCTACCACATCCTTTTTATCTTTCTTTTGAAAATGAACACACAGAAGAACGGTTTGATATGTCACTTAATTTGGAACTAAACAAGGTTACTGGCTCAAATTATCTTTGGGTAATTTATATCTCTCGGCAACACTGTCATTTTGTGCAAACAGGAGCGCGTATCACATTTAAAGCTCGCCATGGTTTGAGTATGAAGGAGTGGGGGTTTCACGTGCTAACCATGCAAGAAATACAGGGCTCAGGAAGTACATCTCATATGCCAAGAAAGAGTGGTTCTTTAACAAAAGTAATTGGTAATGTAACGGAAACCAGCAGCAGCTTTGAGCCTAAAATCCAGCTTCCTTACAACTGGTTACTTTCTGAAGAAGATGAAGTCGAGAATCATTCAGCAAAGAGGAAAGAAAATAATCTTTCTAATCTGGGCTTTTAA 2139 0.3876 MTLLANLSGRHIMNKPESEEIENIVQAVIEKLGRKFSGSSDDLIGIQPRVAALERLLNLKSEEDGFRVLGIWGMDGIGKKTIASVLLWLYEDFHLALMTETRTTEVRAIVLDQREDDFGFKQLKASDLSKLGFVEMLILRHKNFLGRLHSLPNTLRCLSWIGYPFTYLPSNFQPHKLVDVNLSDSSLEQLWTGIQYLPHLKRMDLSNSKNLRMTPRFDGMQNLERLDFTGCTNLSEVHPSIGLLEKLVFLSLQNCKSLVSLNFDSESRLSSLKVLRLFGCTKLENPLDFTGALILEYIDMDQCKGLATIHESIGTLAKLRFLSLRECTNLVTIPDCLNGMTSLVTLDLRGCLNFTNMPVDSPPISLIYLDLSFCNISEVPDAIGELRFLERLNLQGNNFITIPSTIKGLSNLSYLNLSHCHRLRDLPDLKPEAGPSNSVGEYFKTTSGSRDHRSGLYFFDCSNMASFSIQSFVVYIQLTWIVRLVQEPRLYRCGFDFVLPWQGKDIHIDLQNHNIPKWFGHQFEGGSIIAINRSKMPLDWVGFVFCVEFEVNNPSSAASSSSPHKSLSSQLPHPFYLSFENEHTEERFDMSLNLELNKVTGSNYLWVIYISRQHCHFVQTGARITFKARHGLSMKEWGFHVLTMQEIQGSGSTSHMPRKSGSLTKVIGNVTETSSSFEPKIQLPYNWLLSEEDEVENHSAKRKENNLSNLGF 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01661 712 Pfam Leucine rich repeat 366 421 IPR001611 GO:0005515
Trre14g01661 712 Gene3D Ribonuclease Inhibitor 363 432 IPR032675 -
Trre14g01661 712 PRINTS Disease resistance protein signature 68 83 - -
Trre14g01661 712 PRINTS Disease resistance protein signature 407 423 - -
Trre14g01661 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 87 285 IPR044974 GO:0006952
Trre14g01661 712 Pfam C-JID domain 512 647 IPR045344 -
Trre14g01661 712 SUPERFAMILY L domain-like 149 428 - -
Trre14g01661 712 Gene3D Ribonuclease Inhibitor 104 289 IPR032675 -
Trre14g01661 712 Gene3D Ribonuclease Inhibitor 290 362 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01661 Trre-Chr14 14912880 14918267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01661 265 428 WRKY Transcription Factor Family AT4G12020 35.152 2.08e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01661 - - psat:127131100 654.825