Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01648 ATGACTGATGCAAATGTTGCTGCATTTGAGGAATTTATCCATGGTTGGATAATTCGTCAAAGAAACTATCTTGATGAGCTTATATCAGCTCAACAACAGCGGCAAGAGTTAGATGATTCTGATAGAATGAATTTGTTAAACAGAGTACTCTGTCACTATGGACAATACTATGAAGAGAAATCAAAGATAGCCCATCAAAATATTCTCCTTCTTTTCTCACCACCATGGTTTAGTTCATTAGAAAGAACCTTTCTTTGGGTGGCAGGGTTCAAACCAGGACTTGCATTTCAACTTGTGAACAAAACTTTGGAGGATTTGTCAGAGGATCAGAGGCATAGATTGAGTGAATTCAAACAAGAGACTAAGATGAAGGAGAGAGAACTCAATGATGAATTAGCTAAGGTTCATGAGAGTATGGCAGGTCCACCTCTTGTTGACATGATTAGAAGCCATGGAAGGGTGTGTTTGAGTAGATCATTCATGGCAGAAGAAGGTACAGTTCCAAGTACAGTGAAGGAAACATTGGAGAATTTGGTAACAAATGCTGATACTTTTAGGACTGAGACAGCTTTGAGAGTTGTGAAGATATTGAAACCAGCTCAGGTTCTCAACTTTTTTGTTGCTGTGGCTGAGCTTCAACTTGGGATAAGGTCTTTGGGTTTGGATAAGGATGCTCAGAGTGGAAACCAAGGTTGA 696 0.3951 MTDANVAAFEEFIHGWIIRQRNYLDELISAQQQRQELDDSDRMNLLNRVLCHYGQYYEEKSKIAHQNILLLFSPPWFSSLERTFLWVAGFKPGLAFQLVNKTLEDLSEDQRHRLSEFKQETKMKERELNDELAKVHESMAGPPLVDMIRSHGRVCLSRSFMAEEGTVPSTVKETLENLVTNADTFRTETALRVVKILKPAQVLNFFVAVAELQLGIRSLGLDKDAQSGNQG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01648 231 Coils Coil 100 134 - -
Trre14g01648 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Trre14g01648 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 230 - -
Trre14g01648 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01648 Trre-Chr14 14849491 14850186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01648 3 220 Calmodulin-binding Proteins AT1G77920 26.222 1.08e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01648 - - gmx:100780874 342.813