Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01644 ATGGAGGGTCATCATCTCCATCATCATCAACAACATCAACAACAACATCATCATCAACAACAACAACAACATAGACAACAACATGCTCATAACATCATAGGTACTAGTGGTGGTGTTGTTAACGTTGATGTCACAGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAAGAGTTTCTTATGATCCGTTCTGAGCTTGATCAAACTTTCATGGAGACAAAGAGGAACAAGCAACTTTGGGAAGTTATTTCTAACAATATGAAGGAAAAGGGTTATCATAGAAGTGCTGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGCTAGAAGCTATGAGACAACAATTTCCATATTACAATGAGCTTCAAGCTATTTTCAGTGCAAGGATGCAAAGAATGCTATGGGCTGAAGCAGAAGGAGGGTCAAAGAAGAAAGGGATGCATGTGTCTTCTGAGGATGAGGAAGAGTTAGGAAATGAAGAGAGTGAGGGAGATCACAAAGGAAATATTAAGAAAAAGAAGAAAAAGGGTAAAATGGTAATTGGTGGAGGAAATGATAGTGGTAGTAGTAGCAATAATTTGAAGGAGATTCTTGAGGAGTTTATGAAGCAACAAATGCAAATGGAAGCTCAATGGATGGAAGCATTTGAGGCAAGAGAGAATGAGAGAAGGTTGAAGGAAATGGAATGGAGACAAACAATGGAAGCATTGGAGAATGAGAGGATAATGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGAAGGGTTAGAGAAGAAGCTAGGGCTGAAAAGAGAGATGCATTAATCACTGCTCTTCTTGATAAGCTCACAAGAGAAGACATGTAG 876 0.3904 MEGHHLHHHQQHQQQHHHQQQQQHRQQHAHNIIGTSGGVVNVDVTDRFPQWSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMELEAMRQQFPYYNELQAIFSARMQRMLWAEAEGGSKKKGMHVSSEDEEELGNEESEGDHKGNIKKKKKKGKMVIGGGNDSGSSSNNLKEILEEFMKQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERIMMEQRWREREEQRRVREEARAEKRDALITALLDKLTREDM 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01644 291 MobiDBLite consensus disorder prediction 148 162 - -
Trre14g01644 291 Pfam Myb/SANT-like DNA-binding domain 50 134 IPR044822 -
Trre14g01644 291 FunFam Zinc finger and SCAN domain-containing 20 51 112 - -
Trre14g01644 291 Coils Coil 200 220 - -
Trre14g01644 291 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Trre14g01644 291 MobiDBLite consensus disorder prediction 9 24 - -
Trre14g01644 291 MobiDBLite consensus disorder prediction 148 201 - -
Trre14g01644 291 Coils Coil 236 263 - -
Trre14g01644 291 CDD GT1 49 114 - -
Trre14g01644 291 Gene3D - 51 112 - -
Trre14g01644 291 PANTHER FI21293P1 11 288 - -
Trre14g01644 291 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01644 Trre-Chr14 14795123 14796624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01644 28 289 Trihelix Transcription Factor Family AT2G38250 54.545 2.15e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre14g01644 Myb_DNA-bind_4 4.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01644 - - tpra:123892994 435.261