Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01640 ATGGGTTCCACTCGCTCTGATAGCTATGCCACACACAAAGAACGCTTACGATGGACACAAAAACTCCATGATCTCTTTGTGGAGGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGCATATTGAAGGTAATGACGGCTATGGGGATTTCAGAGTTGAGTATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCACTACAAGAGGAAAGGTTGAGAAGAAAAACATATCAGATATACTGCCAAATTTCTGTTCTATATCTGCTCTTCAGCTAAAGGAAGTCCTTCAAATGCAAGCAGAGGTGCAAAAACGCATGGATGACAGAATTGAGGTTCAAAAAATGTTGAAGCTGAAAATTGAAGCACAAGGAAAGTACCTAGACAGAATTGGACAAAGTAATCAAAGCAAAACAATTACAAGAAAAGCTTGCAAACCTTTTGTTGGCAAAGCTACACCTCTTCCCTCTCTTTCTGAGGAACATGAATCCTTAAAAATACAATCTGAGGAAAAACATCAAGCAGCCAAAAAGCTAAAGATAAGAGATGATGAGGATGTTTTTCCTATAGGTTTTGAACTAGGACCATCAACAATGTCAGAATTCTGCAACCAAACTTGGAACAATCTTTCTTGGATTCAGCTGGCTGAAGCAACATGCCAATTATCACCTTTGGTGTCAAGTTTCTTATTATAA 726 0.3967 MGSTRSDSYATHKERLRWTQKLHDLFVEAVNRLGGPDRATPKGILKVMTAMGISELSIYHVKSHLQKYRISKLIPESTTRGKVEKKNISDILPNFCSISALQLKEVLQMQAEVQKRMDDRIEVQKMLKLKIEAQGKYLDRIGQSNQSKTITRKACKPFVGKATPLPSLSEEHESLKIQSEEKHQAAKKLKIRDDEDVFPIGFELGPSTMSEFCNQTWNNLSWIQLAEATCQLSPLVSSFLL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01640 241 Gene3D - 12 73 - -
Trre14g01640 241 FunFam Two-component response regulator 9 73 - -
Trre14g01640 241 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Trre14g01640 241 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Trre14g01640 241 SUPERFAMILY Homeodomain-like 11 70 IPR009057 -
Trre14g01640 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 171 IPR044848 GO:0003700
Trre14g01640 241 Pfam MYB-CC type transfactor, LHEQLE motif 102 145 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01640 Trre-Chr14 14682194 14685948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01640 10 138 G2-like Transcription Factor Family AT4G28610 50.370 6.61e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g01640 Myb_DNA-binding 6.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01640 - - psat:127127459 380.563