Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01622 ATGGCTTCTTGCCAAATAGCACAAGAACAACAACCTTGGCTTTTGGAGAATGGTAATCCAAAGGTCTTGACCAAGGAATCAAGACATGGACATGGACGGAGCCGAAACGCGCATAACCTTTCTACGTCTTCGTTGCGCAAGAAATCTGATTATACTCTTTTGTCGAAGGTTCAACGTGCTTCATTTCAGAATGTCTTGCTTAACATCCAAGAGGTTATTCTTGGTACCAAACTGTCCATTCTCTTCCTTGCCATTCCTGCTGCCATCCTTGCTCATTACTTTGGCTTAGGAAGATCGTGGGTTTTCATACTGAGCTTACTTGGCCTTACTCCACTTGCAGAACGTGTGAGCTTCCTTACAGAACAAATTGCCTTCTCCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATATTACTGAGCTGATAATAGCAATATTTGCTCTTAGCAACAACCAAATTGCTGTGGTCAAGTATTCTCTTTTAGGCTCCATCCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCTCTTCTTTTTGGCGGCATTGCAAACCTTGGAGTGGAGCAAAAATATGACAAAAGACAAGCAGATGTGAATTCACTGATGCTTCTATTGGCATTGCTATGCCATTCGCTTCCTTTGCTATTCACATACAGTGTTGCAACACCTGAACTCGCAGTAGAACCTACACTCAACCTGTCAAGAACTGCTAGCATCGTGATGTTAGGTGCATATGTTGTTTATTTGGTCTTTCAACTATGGACACAGAGACAATTATTTGAAGCTGAAGATGAAGGTGAAGGTGAGAACGATGAGGCAGAAGAAGAAGCTGTGATTGGATTCTGGAGTGCATTTGCTTGGTTGGCTGGAATGACTGTTTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCAGAATCATGGGGTTTGTCTGTCAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGACATTACCTTAGGTGTTGCATTGGGTTCTGCTACTCAAATTGCAATGTTTGCGGTTCCTCTATGTGTAACTATTGCTTGGATAATGGGTGTGAAAATGGACTTGAACTTCAACCTTCTCGAGACTGGTTCTCTTGCTTTGGCAATTATTGTCACTGGCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTATTCTCCTACTTTGCTACTTTGTTATTGGTGCTTGTTTCTTTGTGCAAAGAACACCCATTAACCAAAATGATGTTCCTAACTTCACTCTTAAATCAGTCACTGATTCAGTTTTAAGCACCTAA 1371 0.4172 MASCQIAQEQQPWLLENGNPKVLTKESRHGHGRSRNAHNLSTSSLRKKSDYTLLSKVQRASFQNVLLNIQEVILGTKLSILFLAIPAAILAHYFGLGRSWVFILSLLGLTPLAERVSFLTEQIAFSTGPTVGGLLNATCGNITELIIAIFALSNNQIAVVKYSLLGSILSNLLLVLGTSLLFGGIANLGVEQKYDKRQADVNSLMLLLALLCHSLPLLFTYSVATPELAVEPTLNLSRTASIVMLGAYVVYLVFQLWTQRQLFEAEDEGEGENDEAEEEAVIGFWSAFAWLAGMTVFIALLSEYVVDTIEDASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQIAMFAVPLCVTIAWIMGVKMDLNFNLLETGSLALAIIVTGFTLQDGTSHYMKGLILLLCYFVIGACFFVQRTPINQNDVPNFTLKSVTDSVLST 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01622 456 NCBIfam calcium/proton exchanger 82 430 IPR004798 GO:0006816|GO:0015369
Trre14g01622 456 Gene3D - 281 430 IPR044880 -
Trre14g01622 456 Gene3D - 129 280 IPR044880 -
Trre14g01622 456 Pfam Sodium/calcium exchanger protein 287 425 IPR004837 GO:0016020|GO:0055085
Trre14g01622 456 Pfam Sodium/calcium exchanger protein 100 257 IPR004837 GO:0016020|GO:0055085
Trre14g01622 456 FunFam Vacuolar cation/proton exchanger 275 431 - -
Trre14g01622 456 NCBIfam calcium/proton exchanger 64 430 - -
Trre14g01622 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 27 434 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01622 Trre-Chr14 14409519 14425849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01622 11 435 Antiporters AT2G38170 66.744 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01622 K07300 - gmx:100779440 639.802