Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01493 ATGTCTTTCACGGCCACCGCAAATGGACTTCCGTCGAACTCAACGGTGGCAATGATGTTGGGCCGACGAAGAATTCCGATACACACATCATTCTATTGGGGTCATAAAGTGGACATATTATTCCATTGCTGGCCCGGGAACAGCGCCGCCATGTATGCGGTGGCGCTGATCCTGGTGTTCGTAATGGCGGTGCTTGTGGAGTGGCTTTCTTTCACTAACATTTTTAAACTCAAACCTGGAACATCAAACGAGGTTGTTGGGTCACTTTTAAGGACGGGGTTGTACGGTGTCCGTACCGCATTCTCGTACTTGGTTATGTTGGCTGTTATGTCGTTTAATGGTGGCGTGTTTCTCGCCGCGATTTTCGGCCACATCATTGGGTTTATGGTTTTTGGTACTATGGCTGTGATGAAGAAATCTGGTGGGTTGGATTCTTCCAAACCGCAGAGTGTGTTTGTTTGA 462 0.4805 MSFTATANGLPSNSTVAMMLGRRRIPIHTSFYWGHKVDILFHCWPGNSAAMYAVALILVFVMAVLVEWLSFTNIFKLKPGTSNEVVGSLLRTGLYGVRTAFSYLVMLAVMSFNGGVFLAAIFGHIIGFMVFGTMAVMKKSGGLDSSKPQSVFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01493 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 26 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre14g01493 153 Pfam Ctr copper transporter family 30 72 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre14g01493 153 Pfam Ctr copper transporter family 86 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01493 Trre-Chr14 13218463 13218924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01493 30 151 Inorganic Solute Cotransporters AT5G59030 45.082 6.33e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01493 K14686 - gmx:100803410 241.891