Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01492 ATGAACATGTCTATGCCTCCAGGACAAGACATGTCAAATGGCACAACAAACATGATGATGAACATGCAAATGAGTTTCTATTGGGGCAGAAAAGCCACAGTTCTTTTTTCTGGATGGCCTAATAACAATCTTGGAATGTATATCTTAGCTATTTTGTTTGTTTTCTTTCTAGCTATGGCTGCCGAGGTTTTGTCGAACCAACCACCTATCAAACGTGGGACTAATCCGCTAATCGGAGGGTTGATTCAATCTTGTGTTCACTTCTTTCGAATCGGTTTCATTTACTTGCTTATGCTTGCTGTTATGTCCTTCAATGTTGGAATCTTCTTTGCTGCTGTTTTTGGTCATACTTTAGGGTTTTTTGTGACGCGGTCGCGTGCTATTGCTGTTGCTAATGGGGAAGATCAACAATCCTTGTCTGATACAATCAAAATTTGA 438 0.3995 MNMSMPPGQDMSNGTTNMMMNMQMSFYWGRKATVLFSGWPNNNLGMYILAILFVFFLAMAAEVLSNQPPIKRGTNPLIGGLIQSCVHFFRIGFIYLLMLAVMSFNVGIFFAAVFGHTLGFFVTRSRAIAVANGEDQQSLSDTIKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01492 145 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 15 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre14g01492 145 Pfam Ctr copper transporter family 24 65 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre14g01492 145 Pfam Ctr copper transporter family 74 122 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01492 Trre-Chr14 13200085 13200522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01492 25 120 Inorganic Solute Cotransporters AT5G59030 48.485 2.89e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01492 K14686 - gmx:100527849 182.956