Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01488 ATGGCTACAAATCAGGAAGAGGTGAAACTTTTGGGAGTTGATGGAAGCCCATTTGTGTGTAGGGTTAAGATTGCTCTAAAGTTTAAGGGAATTGAATACAAATTTGTTGAAGAAAACTTGGCCAATAAAAGTGAAGAACTCCTCAAATACAATCCAGTTTATAAAAAGGTTCCAGTTTTTGTTCATAATGATAAGCCTATCTCAGAATCTCTTGTCATTCTTGAGTACATTGATGAGATTTGGAAACAAAATCCCATTTTGCCTTCTGATCCATACGAAAAATCGTTGGCTCGATTTTGGGCCAAGTTCATCGACGACAAGATCGTGACTTCATCGTTTAAAGCTGTTTTTGCTGTTAACGATGAGAAAGAGCGCGAGAAGAATGTCGAAGAATCATCTCAGAGTCTTCAGATACTTGAGAATGAGCTGAAAGGAAAGTTCTTTGGGGGAGAAGAGATTAACTTTGTGGATATTGCTGCTGTGTTCATTGCTTTTTGGATCCCTTTGGTTCAAGACATTACTGATTTGAAATTGTTCACTAATGAAAAGTATCCAAAGCTTTACAATTGGAGTCAAGAATTGCTTAACCATCCTGTTGTGAAGGAGAATCTGCCTCCTAGAGACCCTCTTTTCGCCTTTTTTAAAGGTCGCTATGATAGCCTTCTTGCTGCTTCAAAATAA 681 0.3789 MATNQEEVKLLGVDGSPFVCRVKIALKFKGIEYKFVEENLANKSEELLKYNPVYKKVPVFVHNDKPISESLVILEYIDEIWKQNPILPSDPYEKSLARFWAKFIDDKIVTSSFKAVFAVNDEKEREKNVEESSQSLQILENELKGKFFGGEEINFVDIAAVFIAFWIPLVQDITDLKLFTNEKYPKLYNWSQELLNHPVVKENLPPRDPLFAFFKGRYDSLLAASK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01488 226 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Trre14g01488 226 FunFam Tau class glutathione S-transferase 87 224 - -
Trre14g01488 226 CDD GST_N_Tau 8 81 - -
Trre14g01488 226 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre14g01488 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Trre14g01488 226 SFLD Main.3: Omega- and Tau-like 4 224 IPR045073 -
Trre14g01488 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre14g01488 226 SFLD Main (cytGST) 4 224 - -
Trre14g01488 226 FunFam Glutathione S-transferase GSTU6 3 87 - -
Trre14g01488 226 Gene3D Glutaredoxin 1 89 - -
Trre14g01488 226 Coils Coil 122 142 - -
Trre14g01488 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Trre14g01488 226 Gene3D - 90 225 - -
Trre14g01488 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre14g01488 226 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Trre14g01488 226 Pfam Glutathione S-transferase, C-terminal domain 119 198 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01488 Trre-Chr14 13089481 13090521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01488 3 221 Glutathione S-transferase Gene Family AT2G29420 48.636 1.18e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01488 K00799 - gmx:100806714 358.221