Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01481 ATGACATCAAATCAAGAAGAGGTGAAGCTTTTTGGAATAGTGGGAAGTCCATTTGTAACAAGGGTGGAGATTGCTCTAAATTTGAAGGGAGTTCAATACAAATTTGTGGAAGAAAAGTGGAAGAGTTTTAGTGATACATTAATCAAATATAACCCAGTTTATAAAAAAGTTCCTGTATTAGTTCATAATGAGAAGCCCATATCCGAGTCACTAGTAATTCTTGAGTATATTGATGAGTCATGGACACCAAATTCAATCTTGCCTTCTGATCCTTACAAAAAAGCTTTGGCTCGTTTTTGGTCGAAGTACATAGATGAGAGTTTTAGTGCCGTACAAAAAGTTGCATTTACTCTTGATGAGAAAGAGCGTGAGAAGTATATTGAGGAAATGCAAGCTTCTTTTCAAATTCTTGAGAATGAACTTAAGGACAAATTCTTTGGTGGAGAAGAGATTGGCCTTGTCGACATTACAGGTGCATTCATAGCATCTTGGAGAATTATTCGATCTCTCATGTGA 516 0.3605 MTSNQEEVKLFGIVGSPFVTRVEIALNLKGVQYKFVEEKWKSFSDTLIKYNPVYKKVPVLVHNEKPISESLVILEYIDESWTPNSILPSDPYKKALARFWSKYIDESFSAVQKVAFTLDEKEREKYIEEMQASFQILENELKDKFFGGEEIGLVDITGAFIASWRIIRSLM 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01481 171 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 167 IPR045073 -
Trre14g01481 171 SUPERFAMILY GST C-terminal domain-like 79 165 IPR036282 -
Trre14g01481 171 CDD GST_N_Tau 8 81 - -
Trre14g01481 171 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 171 IPR010987 -
Trre14g01481 171 Pfam Glutathione S-transferase, C-terminal domain 117 164 IPR004046 -
Trre14g01481 171 Gene3D - 90 170 - -
Trre14g01481 171 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre14g01481 171 CDD GST_C_Tau 91 164 IPR045074 GO:0004364|GO:0006749
Trre14g01481 171 Gene3D Glutaredoxin 1 89 - -
Trre14g01481 171 SFLD Main.3: Omega- and Tau-like 4 164 IPR045073 -
Trre14g01481 171 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre14g01481 171 SFLD Main (cytGST) 4 164 - -
Trre14g01481 171 FunFam Glutathione S-transferase GSTU6 3 88 - -
Trre14g01481 171 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01481 Trre-Chr14 13046800 13048046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01481 4 164 Glutathione S-transferase Gene Family AT3G09270 53.939 1.60e-54 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01481 K00799 - gmx:100527851 227.254