Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01478 ATGGCATCAAATCAGGAAGAAGAGGTTCAGCTTTTTGGAGTGGTGCCAAGTCCATTTGTAACTAGAGTTGACATAGCTCTAAATTTGAAGGGAGTTCAATACAAATTTGTGGAAGAAAACTTAGGAAATTTTAGTGATACACTAATCAAATACAACCCTGTTCACAAGAAAGTTCCAGTATTAGTTCATAATGGAAAACCCATCTCAGAATCTCGTGTGATTCTTGAGTATATTGATGACACTTGGAATCAAAATCCAATCTTGCCATCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCCAATTTCATAGATGATAAGTTTTTGAGTGCTGTACGGAAATGGAAAGAAAACAATGAAGAGAGTATTGAGGAAATGGAATTGGCTTTTCAATTTCTTGAGAATGAGCTCAATGACAAATTCTTTGGTGGAGAAGGGATTGGCATTGTTGACATTACTGCAGTTTTCATAGCTTATTGGTTTCCTATTATACAAGAAATAATAGGATTGAAGTTGTTAACTATTGAGAAATTTCCAAAGCTTTACAAATGGAGCCAAGACTTCACCAATCATCAAGCTGTCAAGGAAAAATTACCTAACAGAGAAACATTGTTTGCCTACTTCAGAGCTCATATTGAAAGTCTTGTTGTTTCAAAATAG 663 0.3544 MASNQEEEVQLFGVVPSPFVTRVDIALNLKGVQYKFVEENLGNFSDTLIKYNPVHKKVPVLVHNGKPISESRVILEYIDDTWNQNPILPSDPYKRALARFWSNFIDDKFLSAVRKWKENNEESIEEMELAFQFLENELNDKFFGGEGIGIVDITAVFIAYWFPIIQEIIGLKLLTIEKFPKLYKWSQDFTNHQAVKEKLPNRETLFAYFRAHIESLVVSK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01478 220 CDD GST_C_Tau 92 211 IPR045074 GO:0004364|GO:0006749
Trre14g01478 220 Gene3D Glutaredoxin 2 90 - -
Trre14g01478 220 Coils Coil 117 137 - -
Trre14g01478 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 204 IPR045073 -
Trre14g01478 220 SUPERFAMILY GST C-terminal domain-like 80 214 IPR036282 -
Trre14g01478 220 FunFam Tau class glutathione S-transferase 88 219 - -
Trre14g01478 220 SFLD Main.3: Omega- and Tau-like 5 216 IPR045073 -
Trre14g01478 220 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Trre14g01478 220 CDD GST_N_Tau 9 82 - -
Trre14g01478 220 Pfam Glutathione S-transferase, C-terminal domain 101 191 IPR004046 -
Trre14g01478 220 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Trre14g01478 220 FunFam Glutathione S-transferase GSTU6 4 88 - -
Trre14g01478 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Trre14g01478 220 SFLD Main (cytGST) 5 216 - -
Trre14g01478 220 Gene3D - 91 220 - -
Trre14g01478 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 206 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01478 Trre-Chr14 13029458 13031120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01478 4 217 Glutathione S-transferase Gene Family AT3G09270 50.679 7.11e-74 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01478 K00799 - gmx:100527851 289.656