Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01477 ATGGCATCAAATCAGGAAGAGGTTAAGCTTTTTGGAATGTTGGCAAGTCCATTTGTGAGCAGAGTGGAGATTGCTCTAAAATTGAAGGGAATTGAATACAAATATGAAGAAGAAAAGTGGGGGAACTTGAGTGATACACTCTTCAAATACAATCCAGTTTATAAAAAAGTTCCTGTGTTAGTTCATAATGATAAGCCCATATCAGAATCACTTGTGATTGTTGAGTATATTGATGAAACTTGGAAACAAAATCCAATCTTACCTTCTGATTCTTACAAAAGAGCTTTGGTTCGTTTTTGGTCCAATTTCATTGATGACAAGTATATGAATGCTCTACGGAAAGTTCTATACACTATTGATGAGAAAGAACGACAAACATGTATTGAGGAATCAGAAGTGGCTCTTCAATTTCTTGAGAATGAACTTAAAGACAAATTCTTTGGTGGAGAAGATATTGGCCTTGTTGACATCACTGCAGTCTTCATAGCTTTTTGGCTCCCTGTTTTACAAGAAGTAATGGGATTAAAGTTGTTGAACAATGAGAAATTTCCCAAGCTTTACAAATGGAGTCAAGACTTCAACAATCACCCAATTGTCAAGGAAAAATTGCCTCCTAGAGAAACCCTTTTGGCCTTCTACAAAGCTCGTTTTGCCTCCTAG 660 0.3636 MASNQEEVKLFGMLASPFVSRVEIALKLKGIEYKYEEEKWGNLSDTLFKYNPVYKKVPVLVHNDKPISESLVIVEYIDETWKQNPILPSDSYKRALVRFWSNFIDDKYMNALRKVLYTIDEKERQTCIEESEVALQFLENELKDKFFGGEDIGLVDITAVFIAFWLPVLQEVMGLKLLNNEKFPKLYKWSQDFNNHPIVKEKLPPRETLLAFYKARFAS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01477 219 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Trre14g01477 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre14g01477 219 SFLD Glutathione Transferase (cytosolic) 4 217 IPR040079 -
Trre14g01477 219 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Trre14g01477 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Trre14g01477 219 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Trre14g01477 219 CDD GST_N_Tau 8 81 - -
Trre14g01477 219 FunFam Tau class glutathione S-transferase 1 89 - -
Trre14g01477 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Trre14g01477 219 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Trre14g01477 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre14g01477 219 FunFam Tau class glutathione S-transferase 87 219 - -
Trre14g01477 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre14g01477 219 Gene3D Glutaredoxin 1 89 - -
Trre14g01477 219 Gene3D - 90 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01477 Trre-Chr14 13008099 13009511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01477 4 219 Glutathione S-transferase Gene Family AT3G09270 53.636 2.46e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01477 K00799 - gmx:547578 319.701