Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01476 ATGGCATCAAATAAGGAAGCGGTAAAGCTTTTTGGAATGGTGCAAAGTCCATTTGTGACAAGGGTTCCAGTTTTTGTTCACAATGACAAGCACTTATCAGAATCACTTGTGATTCTTGAGTACATTGATGAAACCTGGAAACAAAATCCTATTTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTATGGTCCAATTTCATTGATGACAAGTGTTTGAATGGTGTACGCAAAGCTGTTTTCACTCTTGATGAAAAAGAACAAGAGAAGAGTATTGAGGAAATAGAAGTAGTTCTTCAATTTTTTGAGAATGAGCTCAAGGATAAATTCTTTGGTGGAGAGAAGATTGGCCTTGTTGACATTAGTGCTGTGTTTATAGCCTTTTGGCTCCCAATTATACAAGAGGTACACTACAAGAAAATGTAG 429 0.373 MASNKEAVKLFGMVQSPFVTRVPVFVHNDKHLSESLVILEYIDETWKQNPILPSDPYKRALARLWSNFIDDKCLNGVRKAVFTLDEKEQEKSIEEIEVVLQFFENELKDKFFGGEKIGLVDISAVFIAFWLPIIQEVHYKKM 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01476 142 Pfam Glutathione S-transferase, N-terminal domain 17 44 IPR004045 -
Trre14g01476 142 Gene3D Glutaredoxin 20 54 - -
Trre14g01476 142 SUPERFAMILY GST C-terminal domain-like 44 137 IPR036282 -
Trre14g01476 142 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 16 137 IPR045073 -
Trre14g01476 142 Gene3D - 55 142 - -
Trre14g01476 142 SUPERFAMILY Thioredoxin-like 16 51 IPR036249 -
Trre14g01476 142 Coils Coil 86 106 - -
Trre14g01476 142 SFLD Glutathione Transferase (cytosolic) 20 134 IPR040079 -
Trre14g01476 142 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 50 IPR004045 -
Trre14g01476 142 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 55 142 IPR010987 -
Trre14g01476 142 CDD GST_C_Tau 56 138 IPR045074 GO:0004364|GO:0006749
Trre14g01476 142 Pfam Glutathione S-transferase, C-terminal domain 83 135 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01476 Trre-Chr14 13003938 13005187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01476 16 137 Glutathione S-transferase Gene Family AT3G09270 50.000 7.37e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01476 K00799 - gmx:547578 180.259