Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01414 ATGAAATTTAATCAATCTTCTCAAATCGGTGAGTTCGTAAACCCTAACCAGCATCGTTCTTCTCCAATTTCCATGTACGAGTTCAATCAAGCTTTTGCACATAGTTCCAAATCTCCATCGAAGTTTGTTCCCGGTGATCTCGATGATGAACACGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGGTTGGACTTTCCATTTTGTTCATTTTTGGAATCATTTCCTTTTATACCGGATTGCTCTTGCTTTCTTGCTTGGACAGTGAACCTGGCCTTGAAACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACCGGACGTATCGCTATTTCAATAGTACTGTACGTCGAATTATATGGCTGTTGCATTGAATATATAATTTTGGAGGGAGACAACTTGGCTTCTTTGTTTCCAAATGCCTACTTAAATTTAGGTGGAATTGAGTTGAGTCCGCAAACGCTCTTTGCTATAGTTGCTGCCTTGGCTGTTCTTCCTACAGTTATGCTCCGTGACCTAAGCATCTTAGTTACATCTCAGGTAACACTTCTTTTTGTGCAAGTAATGACTTAA 606 0.4059 MKFNQSSQIGEFVNPNQHRSSPISMYEFNQAFAHSSKSPSKFVPGDLDDEHGINVLCGVGILSTPYAAKEGGWVGLSILFIFGIISFYTGLLLLSCLDSEPGLETYPDIGQAAFGTTGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLGGIELSPQTLFAIVAALAVLPTVMLRDLSILVTSQVTLLFVQVMT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01414 201 PANTHER OS05G0424000 PROTEIN-RELATED 51 188 - -
Trre14g01414 201 Pfam Transmembrane amino acid transporter protein 53 188 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01414 Trre-Chr14 12345063 12347746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01414 51 187 Amino Acid or Auxin Permease AAAP Family AT2G39130 73.723 1.21e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01414 K15015 - gmx:100810530 230.335