Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01394 ATGCAACTAAAGTTTGTGTCTATTTTTCAGTTATACGCAGGCCTTCAAAGTCTGTTGGGAAAGCCATTTCCAGTGGGTGCGGATGGTCTAACATGGACATTGGTGAAGTGTATAGATAATGAGAGTTACGATCTTGATAGTAGTAAAAGTGGATTATGGGCAGAATGTCACAGCAAACTCAATGTTGCTCTTTCGGTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCCGCATCTTGTAGAGATCTGGTGGATGATGTTACCATCTACTGA 273 0.4139 MQLKFVSIFQLYAGLQSLLGKPFPVGADGLTWTLVKCIDNESYDLDSSKSGLWAECHSKLNVALSVMHECFEPLKESASCRDLVDDVTIY 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01394 90 PANTHER PHD FINGER PROTEIN 12 10 87 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01394 Trre-Chr14 12213588 12213860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01394 10 87 PHD Transcription Factor Family AT5G58610 44.872 6.26e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01394 - - psat:127084556 119.783