Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01382 ATGAAAATCAATCTTCAATTGTTGGCATCAGTTCTGGTGTTCCTTTTTCTCCCGGTTTTATCCCAACTTGACCAGTTTATGTATGCAGGATTCAAGAATGTTGGTCACAACAATCTAACGTTGGATGGAATTGCAGTGATAGAGAAAAATGGAATAATAAGATTAACAAATGAAACAAGCAGATTAATCGGTCATGCTTTTTATTCTCTACCATTGCAGCTAAAGAACTCGACAACTGGTAGAGCTTTTTCCTTTTCTTCATCTTTTGCTTTTGCTGTTGTTTCCGAGGTTCCTAAATATGGTGGTCATGGCATGGCTTTCACAATAGCACCTACAAAAGATCTCAAAGGTTTACCTATTCAGTATCTTGGTCTTCTCAATTCAAGTAGTGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTCAAAGACTTCGATTTTGGCGACATCAATGATAACCATGTTGGAATAGACATCAATACTTTGCATTCAAATGCATCTGTTACTGCTGGCTATTACATTAATGATTCAACCAAACAAGATATTAATATCAAAAGTGGGAAACCAATACTTGTTTGGGTTGATTATGATTCTTTAGTGAATCTTGTTAGCGTTACAATTTCTCCAACTTCAATTAAACCCAAAAAACCAATCTTGTCCTTTCATGTGGATCTATCACCTATTCTTCATGATACTATGTATGTTGGATTCTCTGCATCTACCGGTATGCTTGCTAGCTCTCATTACTTATTGGGTTGGAGCTTTAAAATCAACGGTCCAGCACCGCCTCTTGATTTGTCTTCACTACCACAACCTCCGCAACCGAAGAAGAAACACACGTCTTTGATAACTGGTATTTCACTTACAGTTTCTGTTATTGTATTATGTTCTGTTGCATTTGGAATTTACCTTTTCAGAAAAATCAAGAATGCTGATGTAATAGAAGCATGGGAGCTTGAAATTGGGCCACATAGATACTCCTATAAAGAGCTCAAGAAAGCTACAAAAGGTTTTAAGGAGAAAGAGCTACTTGGACAGGGTGGTTTTGGAAGAGTTTACAAAGGGACGTTGCCGAAATCAAAGATCGAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAGGGAATTCGTGTCTGAAATCTCAAGCTTAGGACGGCTTTGCCACCGGAATTTGGTTAAGTTACTTGGTTGGTGTCGCCGCAGAGGCGACCTCTTACTTGTGTACGATTTCATGGCTAACGGAAGCTTAGACAAGTACTTGTTTGAAGATTCAGAAGTTGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAAGATGTTGCTTCAGGTCTTTTGTTTTTGCATGAAGGCTATGAACAAGTGGTAATACACAGAGATGTTAAGGCTAGTAATGTGCTGTTGGATTTTGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTACGAACACGGTGCTAATCCCGGCACAACAAGAGTGGTGGGAACATTAGGCTATTTGGCACCGGAATTGCCTAGAACAGGAAAGGCATCTACAAGCTCTGACGTTTTTGCATTTGGCGCACTTCTACTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAGCCAAATGCATTACAAGAAGAGTTGGTGTTGGTTGAATGGGTGTGGGAAAAGTATAAACAAGGAAGGTTACTTGAAGTAGTGGATCCTAAATTAAATGGTAGTTTTGATGAAATTGAGGTTATAATGGTGTTGAAATTGGGGATTATTTGTTCAAATGATGTGCCTACTTTAAGGCCTTGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAATTGAGAAAGCCAGGAGGTATTGATTCACAAGAGGGGTTTGATGAATTCTTGGATTCATTTGGAACTTCTAATTCATTTGATAAGACTAGTTCAAGCTCCTATCTTTGA 1971 0.3871 MKINLQLLASVLVFLFLPVLSQLDQFMYAGFKNVGHNNLTLDGIAVIEKNGIIRLTNETSRLIGHAFYSLPLQLKNSTTGRAFSFSSSFAFAVVSEVPKYGGHGMAFTIAPTKDLKGLPIQYLGLLNSSSVGNFSNHLFAVEFDTVKDFDFGDINDNHVGIDINTLHSNASVTAGYYINDSTKQDINIKSGKPILVWVDYDSLVNLVSVTISPTSIKPKKPILSFHVDLSPILHDTMYVGFSASTGMLASSHYLLGWSFKINGPAPPLDLSSLPQPPQPKKKHTSLITGISLTVSVIVLCSVAFGIYLFRKIKNADVIEAWELEIGPHRYSYKELKKATKGFKEKELLGQGGFGRVYKGTLPKSKIEVAVKRVSHESKQGLREFVSEISSLGRLCHRNLVKLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEVVLSWEQRFKIIKDVASGLLFLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPNALQEELVLVEWVWEKYKQGRLLEVVDPKLNGSFDEIEVIMVLKLGIICSNDVPTLRPCMRQVVRILDGEVELPNELRKPGGIDSQEGFDEFLDSFGTSNSFDKTSSSSYL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01382 656 CDD STKc_IRAK 348 614 - -
Trre14g01382 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 282 IPR013320 -
Trre14g01382 656 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Trre14g01382 656 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Trre14g01382 656 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Trre14g01382 656 Pfam Protein kinase domain 342 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01382 656 ProSiteProfiles Protein kinase domain profile. 342 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01382 656 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Trre14g01382 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Trre14g01382 656 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Trre14g01382 656 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Trre14g01382 656 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Trre14g01382 656 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Trre14g01382 656 PANTHER - 31 619 - -
Trre14g01382 656 Gene3D - 24 263 - -
Trre14g01382 656 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
Trre14g01382 656 SMART serkin_6 342 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01382 Trre-Chr14 12064219 12066189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01382 19 654 Receptor kinase-like Gene Family AT3G55550 59.084 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01382 Lectin_legB 2.7e-74 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01382 - - gmx:100816866 971.459